Experiment: Paraquat dichloride 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS31150 and AZOBR_RS31155 are separated by 350 nucleotides AZOBR_RS31155 and AZOBR_RS31160 are separated by 123 nucleotides
AZOBR_RS31150: AZOBR_RS31150 - putative Cold-shock DNA-binding protein (fragment), at 353,800 to 354,255
_RS31150
AZOBR_RS31155: AZOBR_RS31155 - AMP-dependent synthetase, at 354,606 to 356,309
_RS31155
AZOBR_RS31160: AZOBR_RS31160 - ADP-L-glycero-D-manno-heptose-6-epimerase, at 356,433 to 357,419
_RS31160
Position (kb) 354
355
356
357 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 353.729 kb on + strand at 353.753 kb on - strand at 354.513 kb on + strand at 354.537 kb on + strand at 354.537 kb on + strand at 354.538 kb on - strand at 354.538 kb on - strand at 354.538 kb on - strand at 354.538 kb on - strand at 354.538 kb on - strand at 354.538 kb on - strand at 354.780 kb on + strand, within AZOBR_RS31155 at 354.883 kb on - strand, within AZOBR_RS31155 at 354.883 kb on - strand, within AZOBR_RS31155 at 354.883 kb on - strand, within AZOBR_RS31155 at 354.897 kb on + strand, within AZOBR_RS31155 at 355.027 kb on - strand, within AZOBR_RS31155 at 355.027 kb on - strand, within AZOBR_RS31155 at 355.260 kb on + strand, within AZOBR_RS31155 at 355.260 kb on + strand, within AZOBR_RS31155 at 355.260 kb on + strand, within AZOBR_RS31155 at 355.261 kb on - strand, within AZOBR_RS31155 at 355.261 kb on - strand, within AZOBR_RS31155 at 355.261 kb on - strand, within AZOBR_RS31155 at 355.545 kb on + strand, within AZOBR_RS31155 at 355.546 kb on - strand, within AZOBR_RS31155 at 355.546 kb on - strand, within AZOBR_RS31155 at 355.944 kb on + strand, within AZOBR_RS31155 at 355.945 kb on - strand, within AZOBR_RS31155 at 355.945 kb on - strand, within AZOBR_RS31155 at 355.945 kb on - strand, within AZOBR_RS31155 at 355.963 kb on - strand, within AZOBR_RS31155 at 355.963 kb on - strand, within AZOBR_RS31155 at 356.046 kb on + strand, within AZOBR_RS31155 at 356.046 kb on + strand, within AZOBR_RS31155 at 356.046 kb on + strand, within AZOBR_RS31155 at 356.046 kb on + strand, within AZOBR_RS31155 at 356.121 kb on + strand, within AZOBR_RS31155 at 356.121 kb on + strand, within AZOBR_RS31155 at 356.122 kb on - strand, within AZOBR_RS31155 at 356.308 kb on - strand at 356.308 kb on - strand at 356.308 kb on - strand at 356.385 kb on + strand at 356.385 kb on + strand at 356.385 kb on + strand at 356.387 kb on + strand at 356.387 kb on + strand at 356.387 kb on + strand at 356.763 kb on + strand, within AZOBR_RS31160 at 356.763 kb on + strand, within AZOBR_RS31160 at 356.763 kb on + strand, within AZOBR_RS31160 at 356.763 kb on + strand, within AZOBR_RS31160 at 356.784 kb on + strand, within AZOBR_RS31160 at 356.859 kb on + strand, within AZOBR_RS31160 at 357.141 kb on + strand, within AZOBR_RS31160 at 357.255 kb on + strand, within AZOBR_RS31160 at 357.288 kb on + strand, within AZOBR_RS31160 at 357.294 kb on + strand, within AZOBR_RS31160 at 357.294 kb on + strand, within AZOBR_RS31160 at 357.294 kb on + strand, within AZOBR_RS31160 at 357.294 kb on + strand, within AZOBR_RS31160
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.02 mg/ml remove 353,729 + +0.8 353,753 - +0.1 354,513 + +0.1 354,537 + -0.9 354,537 + +0.1 354,538 - +0.2 354,538 - +0.1 354,538 - -0.0 354,538 - -0.4 354,538 - -1.2 354,538 - -0.5 354,780 + AZOBR_RS31155 0.10 -0.4 354,883 - AZOBR_RS31155 0.16 -1.4 354,883 - AZOBR_RS31155 0.16 -0.4 354,883 - AZOBR_RS31155 0.16 +1.5 354,897 + AZOBR_RS31155 0.17 +0.2 355,027 - AZOBR_RS31155 0.25 -0.8 355,027 - AZOBR_RS31155 0.25 +0.3 355,260 + AZOBR_RS31155 0.38 -2.4 355,260 + AZOBR_RS31155 0.38 +0.1 355,260 + AZOBR_RS31155 0.38 -0.1 355,261 - AZOBR_RS31155 0.38 +1.3 355,261 - AZOBR_RS31155 0.38 -0.4 355,261 - AZOBR_RS31155 0.38 +0.2 355,545 + AZOBR_RS31155 0.55 -4.7 355,546 - AZOBR_RS31155 0.55 +0.2 355,546 - AZOBR_RS31155 0.55 -0.8 355,944 + AZOBR_RS31155 0.79 +0.4 355,945 - AZOBR_RS31155 0.79 +0.0 355,945 - AZOBR_RS31155 0.79 -0.4 355,945 - AZOBR_RS31155 0.79 -0.9 355,963 - AZOBR_RS31155 0.80 +1.8 355,963 - AZOBR_RS31155 0.80 +0.4 356,046 + AZOBR_RS31155 0.85 -0.4 356,046 + AZOBR_RS31155 0.85 -1.1 356,046 + AZOBR_RS31155 0.85 -0.2 356,046 + AZOBR_RS31155 0.85 +0.6 356,121 + AZOBR_RS31155 0.89 +0.4 356,121 + AZOBR_RS31155 0.89 -0.6 356,122 - AZOBR_RS31155 0.89 +1.4 356,308 - -1.5 356,308 - +1.7 356,308 - -2.9 356,385 + -2.0 356,385 + -1.1 356,385 + -1.1 356,387 + -0.7 356,387 + +0.2 356,387 + -1.3 356,763 + AZOBR_RS31160 0.33 -0.2 356,763 + AZOBR_RS31160 0.33 -2.8 356,763 + AZOBR_RS31160 0.33 -1.7 356,763 + AZOBR_RS31160 0.33 +0.2 356,784 + AZOBR_RS31160 0.36 +1.0 356,859 + AZOBR_RS31160 0.43 +0.6 357,141 + AZOBR_RS31160 0.72 -1.0 357,255 + AZOBR_RS31160 0.83 +0.7 357,288 + AZOBR_RS31160 0.87 -1.1 357,294 + AZOBR_RS31160 0.87 -0.0 357,294 + AZOBR_RS31160 0.87 +0.6 357,294 + AZOBR_RS31160 0.87 -0.3 357,294 + AZOBR_RS31160 0.87 -0.0
Or see this region's nucleotide sequence