Experiment: Paraquat dichloride 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS30850 and AZOBR_RS30855 are separated by 388 nucleotides AZOBR_RS30855 and AZOBR_RS30860 overlap by 8 nucleotides
AZOBR_RS30850: AZOBR_RS30850 - hypothetical protein, at 287,430 to 289,880
_RS30850
AZOBR_RS30855: AZOBR_RS30855 - chemotaxis protein CheY, at 290,269 to 290,751
_RS30855
AZOBR_RS30860: AZOBR_RS30860 - sensor histidine kinase, at 290,744 to 293,035
_RS30860
Position (kb) 290
291 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 289.360 kb on + strand, within AZOBR_RS30850 at 289.361 kb on - strand, within AZOBR_RS30850 at 289.361 kb on - strand, within AZOBR_RS30850 at 289.381 kb on + strand, within AZOBR_RS30850 at 289.381 kb on + strand, within AZOBR_RS30850 at 289.381 kb on + strand, within AZOBR_RS30850 at 289.381 kb on + strand, within AZOBR_RS30850 at 289.381 kb on + strand, within AZOBR_RS30850 at 289.381 kb on + strand, within AZOBR_RS30850 at 289.382 kb on - strand, within AZOBR_RS30850 at 289.382 kb on - strand, within AZOBR_RS30850 at 289.384 kb on + strand, within AZOBR_RS30850 at 289.523 kb on - strand, within AZOBR_RS30850 at 289.804 kb on + strand at 289.805 kb on - strand at 289.805 kb on - strand at 289.943 kb on - strand at 289.943 kb on - strand at 289.943 kb on - strand at 290.127 kb on + strand at 290.429 kb on + strand, within AZOBR_RS30855 at 290.429 kb on + strand, within AZOBR_RS30855 at 290.430 kb on - strand, within AZOBR_RS30855 at 290.430 kb on - strand, within AZOBR_RS30855 at 290.802 kb on + strand at 290.802 kb on + strand at 290.803 kb on - strand at 290.803 kb on - strand at 291.061 kb on - strand, within AZOBR_RS30860 at 291.321 kb on + strand, within AZOBR_RS30860 at 291.427 kb on - strand, within AZOBR_RS30860 at 291.720 kb on + strand, within AZOBR_RS30860 at 291.720 kb on + strand, within AZOBR_RS30860 at 291.720 kb on + strand, within AZOBR_RS30860 at 291.720 kb on + strand, within AZOBR_RS30860 at 291.721 kb on - strand, within AZOBR_RS30860 at 291.721 kb on - strand, within AZOBR_RS30860
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.02 mg/ml remove 289,360 + AZOBR_RS30850 0.79 +0.5 289,361 - AZOBR_RS30850 0.79 -0.2 289,361 - AZOBR_RS30850 0.79 -0.1 289,381 + AZOBR_RS30850 0.80 +0.7 289,381 + AZOBR_RS30850 0.80 -4.3 289,381 + AZOBR_RS30850 0.80 -0.3 289,381 + AZOBR_RS30850 0.80 +0.4 289,381 + AZOBR_RS30850 0.80 -1.5 289,381 + AZOBR_RS30850 0.80 -0.6 289,382 - AZOBR_RS30850 0.80 +0.5 289,382 - AZOBR_RS30850 0.80 +0.1 289,384 + AZOBR_RS30850 0.80 +1.0 289,523 - AZOBR_RS30850 0.85 +0.7 289,804 + +0.4 289,805 - -0.1 289,805 - -0.0 289,943 - +0.2 289,943 - +0.4 289,943 - -1.4 290,127 + +0.7 290,429 + AZOBR_RS30855 0.33 -0.3 290,429 + AZOBR_RS30855 0.33 +1.4 290,430 - AZOBR_RS30855 0.33 +0.6 290,430 - AZOBR_RS30855 0.33 +0.6 290,802 + +0.6 290,802 + +0.9 290,803 - +0.3 290,803 - -0.1 291,061 - AZOBR_RS30860 0.14 +0.0 291,321 + AZOBR_RS30860 0.25 -0.7 291,427 - AZOBR_RS30860 0.30 +0.7 291,720 + AZOBR_RS30860 0.43 +0.8 291,720 + AZOBR_RS30860 0.43 +0.0 291,720 + AZOBR_RS30860 0.43 +0.2 291,720 + AZOBR_RS30860 0.43 -2.8 291,721 - AZOBR_RS30860 0.43 +0.7 291,721 - AZOBR_RS30860 0.43 +0.8
Or see this region's nucleotide sequence