Experiment: Paraquat dichloride 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS30520 and AZOBR_RS30525 are separated by 16 nucleotides AZOBR_RS30525 and AZOBR_RS30530 are separated by 281 nucleotides
AZOBR_RS30520: AZOBR_RS30520 - flagellar motor protein MotA, at 195,155 to 196,015
_RS30520
AZOBR_RS30525: AZOBR_RS30525 - hypothetical protein, at 196,032 to 197,018
_RS30525
AZOBR_RS30530: AZOBR_RS30530 - peptidase M23, at 197,300 to 198,643
_RS30530
Position (kb) 196
197
198 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 195.035 kb on - strand at 195.207 kb on - strand at 195.523 kb on - strand, within AZOBR_RS30520 at 195.539 kb on + strand, within AZOBR_RS30520 at 195.539 kb on + strand, within AZOBR_RS30520 at 195.539 kb on + strand, within AZOBR_RS30520 at 195.803 kb on + strand, within AZOBR_RS30520 at 195.804 kb on - strand, within AZOBR_RS30520 at 195.845 kb on + strand, within AZOBR_RS30520 at 195.846 kb on - strand, within AZOBR_RS30520 at 195.863 kb on + strand, within AZOBR_RS30520 at 195.863 kb on + strand, within AZOBR_RS30520 at 195.864 kb on - strand, within AZOBR_RS30520 at 195.864 kb on - strand, within AZOBR_RS30520 at 195.867 kb on - strand, within AZOBR_RS30520 at 196.791 kb on + strand, within AZOBR_RS30525 at 196.791 kb on + strand, within AZOBR_RS30525 at 196.815 kb on + strand, within AZOBR_RS30525 at 196.816 kb on - strand, within AZOBR_RS30525 at 196.816 kb on - strand, within AZOBR_RS30525 at 196.816 kb on - strand, within AZOBR_RS30525 at 197.112 kb on + strand at 197.112 kb on + strand at 197.112 kb on + strand at 197.270 kb on - strand at 197.270 kb on - strand at 197.270 kb on - strand at 197.508 kb on + strand, within AZOBR_RS30530 at 197.509 kb on - strand, within AZOBR_RS30530 at 197.509 kb on - strand, within AZOBR_RS30530 at 197.509 kb on - strand, within AZOBR_RS30530 at 197.551 kb on - strand, within AZOBR_RS30530 at 197.551 kb on - strand, within AZOBR_RS30530 at 197.551 kb on - strand, within AZOBR_RS30530 at 197.622 kb on + strand, within AZOBR_RS30530 at 197.661 kb on + strand, within AZOBR_RS30530 at 197.661 kb on + strand, within AZOBR_RS30530 at 197.661 kb on + strand, within AZOBR_RS30530 at 197.662 kb on - strand, within AZOBR_RS30530 at 197.662 kb on - strand, within AZOBR_RS30530 at 197.671 kb on - strand, within AZOBR_RS30530 at 197.877 kb on + strand, within AZOBR_RS30530 at 197.878 kb on - strand, within AZOBR_RS30530 at 197.878 kb on - strand, within AZOBR_RS30530 at 197.878 kb on - strand, within AZOBR_RS30530 at 197.914 kb on - strand, within AZOBR_RS30530 at 197.914 kb on - strand, within AZOBR_RS30530 at 197.923 kb on - strand, within AZOBR_RS30530 at 198.007 kb on - strand, within AZOBR_RS30530 at 198.007 kb on - strand, within AZOBR_RS30530
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.02 mg/ml remove 195,035 - +0.3 195,207 - +0.6 195,523 - AZOBR_RS30520 0.43 -1.0 195,539 + AZOBR_RS30520 0.45 -1.1 195,539 + AZOBR_RS30520 0.45 -1.9 195,539 + AZOBR_RS30520 0.45 -0.5 195,803 + AZOBR_RS30520 0.75 -1.5 195,804 - AZOBR_RS30520 0.75 -0.7 195,845 + AZOBR_RS30520 0.80 -0.1 195,846 - AZOBR_RS30520 0.80 -0.8 195,863 + AZOBR_RS30520 0.82 -1.6 195,863 + AZOBR_RS30520 0.82 -1.6 195,864 - AZOBR_RS30520 0.82 -1.6 195,864 - AZOBR_RS30520 0.82 -1.7 195,867 - AZOBR_RS30520 0.83 -0.9 196,791 + AZOBR_RS30525 0.77 -0.5 196,791 + AZOBR_RS30525 0.77 -0.3 196,815 + AZOBR_RS30525 0.79 +0.2 196,816 - AZOBR_RS30525 0.79 +0.3 196,816 - AZOBR_RS30525 0.79 +0.3 196,816 - AZOBR_RS30525 0.79 +0.1 197,112 + +0.2 197,112 + -0.8 197,112 + +0.2 197,270 - -1.3 197,270 - -0.6 197,270 - -3.2 197,508 + AZOBR_RS30530 0.15 +0.8 197,509 - AZOBR_RS30530 0.16 -0.5 197,509 - AZOBR_RS30530 0.16 +1.8 197,509 - AZOBR_RS30530 0.16 +1.1 197,551 - AZOBR_RS30530 0.19 +1.0 197,551 - AZOBR_RS30530 0.19 +0.6 197,551 - AZOBR_RS30530 0.19 +1.2 197,622 + AZOBR_RS30530 0.24 +1.3 197,661 + AZOBR_RS30530 0.27 -0.6 197,661 + AZOBR_RS30530 0.27 -1.2 197,661 + AZOBR_RS30530 0.27 +1.6 197,662 - AZOBR_RS30530 0.27 -0.6 197,662 - AZOBR_RS30530 0.27 +0.9 197,671 - AZOBR_RS30530 0.28 +0.1 197,877 + AZOBR_RS30530 0.43 +0.8 197,878 - AZOBR_RS30530 0.43 -3.2 197,878 - AZOBR_RS30530 0.43 +1.7 197,878 - AZOBR_RS30530 0.43 +0.5 197,914 - AZOBR_RS30530 0.46 +0.3 197,914 - AZOBR_RS30530 0.46 -2.4 197,923 - AZOBR_RS30530 0.46 +0.4 198,007 - AZOBR_RS30530 0.53 +1.2 198,007 - AZOBR_RS30530 0.53 +1.7
Or see this region's nucleotide sequence