Experiment: Paraquat dichloride 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS30385 and AZOBR_RS30390 are separated by 13 nucleotides AZOBR_RS30390 and AZOBR_RS30395 are separated by 21 nucleotides
AZOBR_RS30385: AZOBR_RS30385 - Fis family transcriptional regulator, at 162,291 to 163,634
_RS30385
AZOBR_RS30390: AZOBR_RS30390 - aspartate aminotransferase, at 163,648 to 165,279
_RS30390
AZOBR_RS30395: AZOBR_RS30395 - transporter, at 165,301 to 166,989
_RS30395
Position (kb) 163
164
165
166 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 163.188 kb on + strand, within AZOBR_RS30385 at 163.188 kb on + strand, within AZOBR_RS30385 at 163.189 kb on - strand, within AZOBR_RS30385 at 163.189 kb on - strand, within AZOBR_RS30385 at 163.189 kb on - strand, within AZOBR_RS30385 at 163.581 kb on + strand at 163.581 kb on + strand at 163.581 kb on + strand at 163.582 kb on - strand at 163.763 kb on + strand at 163.908 kb on - strand, within AZOBR_RS30390 at 163.908 kb on - strand, within AZOBR_RS30390 at 163.908 kb on - strand, within AZOBR_RS30390 at 163.919 kb on + strand, within AZOBR_RS30390 at 163.958 kb on + strand, within AZOBR_RS30390 at 163.958 kb on + strand, within AZOBR_RS30390 at 163.958 kb on + strand, within AZOBR_RS30390 at 163.958 kb on + strand, within AZOBR_RS30390 at 163.959 kb on - strand, within AZOBR_RS30390 at 163.959 kb on - strand, within AZOBR_RS30390 at 163.961 kb on + strand, within AZOBR_RS30390 at 163.961 kb on + strand, within AZOBR_RS30390 at 163.961 kb on + strand, within AZOBR_RS30390 at 163.961 kb on + strand, within AZOBR_RS30390 at 163.962 kb on - strand, within AZOBR_RS30390 at 163.962 kb on - strand, within AZOBR_RS30390 at 163.962 kb on - strand, within AZOBR_RS30390 at 164.058 kb on - strand, within AZOBR_RS30390 at 164.220 kb on - strand, within AZOBR_RS30390 at 164.333 kb on + strand, within AZOBR_RS30390 at 164.348 kb on + strand, within AZOBR_RS30390 at 164.415 kb on - strand, within AZOBR_RS30390 at 164.634 kb on - strand, within AZOBR_RS30390 at 164.660 kb on + strand, within AZOBR_RS30390 at 164.741 kb on + strand, within AZOBR_RS30390 at 164.741 kb on + strand, within AZOBR_RS30390 at 164.741 kb on + strand, within AZOBR_RS30390 at 164.741 kb on + strand, within AZOBR_RS30390 at 164.741 kb on + strand, within AZOBR_RS30390 at 164.741 kb on + strand, within AZOBR_RS30390 at 164.741 kb on + strand, within AZOBR_RS30390 at 164.742 kb on - strand, within AZOBR_RS30390 at 164.742 kb on - strand, within AZOBR_RS30390 at 164.828 kb on + strand, within AZOBR_RS30390 at 164.829 kb on - strand, within AZOBR_RS30390 at 164.829 kb on - strand, within AZOBR_RS30390 at 164.829 kb on - strand, within AZOBR_RS30390 at 164.879 kb on + strand, within AZOBR_RS30390 at 164.879 kb on + strand, within AZOBR_RS30390 at 164.879 kb on + strand, within AZOBR_RS30390 at 164.954 kb on + strand, within AZOBR_RS30390 at 164.955 kb on - strand, within AZOBR_RS30390 at 164.955 kb on - strand, within AZOBR_RS30390 at 165.011 kb on + strand, within AZOBR_RS30390 at 165.011 kb on + strand, within AZOBR_RS30390 at 165.074 kb on + strand, within AZOBR_RS30390 at 165.074 kb on + strand, within AZOBR_RS30390 at 165.074 kb on + strand, within AZOBR_RS30390 at 165.074 kb on + strand, within AZOBR_RS30390 at 165.074 kb on + strand, within AZOBR_RS30390 at 165.075 kb on - strand, within AZOBR_RS30390 at 165.263 kb on + strand at 165.359 kb on + strand at 165.359 kb on + strand at 165.491 kb on + strand, within AZOBR_RS30395 at 165.701 kb on + strand, within AZOBR_RS30395 at 165.824 kb on + strand, within AZOBR_RS30395 at 165.824 kb on + strand, within AZOBR_RS30395 at 165.825 kb on - strand, within AZOBR_RS30395 at 165.825 kb on - strand, within AZOBR_RS30395 at 165.825 kb on - strand, within AZOBR_RS30395 at 165.825 kb on - strand, within AZOBR_RS30395 at 165.905 kb on + strand, within AZOBR_RS30395 at 165.905 kb on + strand, within AZOBR_RS30395 at 165.906 kb on - strand, within AZOBR_RS30395 at 165.989 kb on + strand, within AZOBR_RS30395 at 165.989 kb on + strand, within AZOBR_RS30395 at 165.989 kb on + strand, within AZOBR_RS30395 at 165.990 kb on - strand, within AZOBR_RS30395 at 166.001 kb on + strand, within AZOBR_RS30395 at 166.002 kb on - strand, within AZOBR_RS30395
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.02 mg/ml remove 163,188 + AZOBR_RS30385 0.67 +0.1 163,188 + AZOBR_RS30385 0.67 -0.1 163,189 - AZOBR_RS30385 0.67 +0.1 163,189 - AZOBR_RS30385 0.67 +0.3 163,189 - AZOBR_RS30385 0.67 -0.6 163,581 + +0.9 163,581 + +0.1 163,581 + -0.2 163,582 - +0.7 163,763 + -0.2 163,908 - AZOBR_RS30390 0.16 -0.2 163,908 - AZOBR_RS30390 0.16 -0.2 163,908 - AZOBR_RS30390 0.16 -1.4 163,919 + AZOBR_RS30390 0.17 +2.5 163,958 + AZOBR_RS30390 0.19 -0.1 163,958 + AZOBR_RS30390 0.19 -0.7 163,958 + AZOBR_RS30390 0.19 -0.3 163,958 + AZOBR_RS30390 0.19 -0.2 163,959 - AZOBR_RS30390 0.19 +0.5 163,959 - AZOBR_RS30390 0.19 -1.8 163,961 + AZOBR_RS30390 0.19 -0.6 163,961 + AZOBR_RS30390 0.19 +0.9 163,961 + AZOBR_RS30390 0.19 -0.5 163,961 + AZOBR_RS30390 0.19 -0.1 163,962 - AZOBR_RS30390 0.19 -1.4 163,962 - AZOBR_RS30390 0.19 -1.8 163,962 - AZOBR_RS30390 0.19 -1.2 164,058 - AZOBR_RS30390 0.25 -0.5 164,220 - AZOBR_RS30390 0.35 -0.2 164,333 + AZOBR_RS30390 0.42 -0.7 164,348 + AZOBR_RS30390 0.43 +0.4 164,415 - AZOBR_RS30390 0.47 +0.4 164,634 - AZOBR_RS30390 0.60 +0.9 164,660 + AZOBR_RS30390 0.62 -1.2 164,741 + AZOBR_RS30390 0.67 +0.8 164,741 + AZOBR_RS30390 0.67 +1.0 164,741 + AZOBR_RS30390 0.67 +1.1 164,741 + AZOBR_RS30390 0.67 +0.8 164,741 + AZOBR_RS30390 0.67 +0.3 164,741 + AZOBR_RS30390 0.67 -0.6 164,741 + AZOBR_RS30390 0.67 -0.3 164,742 - AZOBR_RS30390 0.67 -0.2 164,742 - AZOBR_RS30390 0.67 +1.0 164,828 + AZOBR_RS30390 0.72 +0.4 164,829 - AZOBR_RS30390 0.72 +0.3 164,829 - AZOBR_RS30390 0.72 +0.7 164,829 - AZOBR_RS30390 0.72 +0.3 164,879 + AZOBR_RS30390 0.75 +0.0 164,879 + AZOBR_RS30390 0.75 +0.3 164,879 + AZOBR_RS30390 0.75 +1.2 164,954 + AZOBR_RS30390 0.80 -0.3 164,955 - AZOBR_RS30390 0.80 +0.4 164,955 - AZOBR_RS30390 0.80 +1.4 165,011 + AZOBR_RS30390 0.84 +0.8 165,011 + AZOBR_RS30390 0.84 +0.6 165,074 + AZOBR_RS30390 0.87 -0.1 165,074 + AZOBR_RS30390 0.87 -1.2 165,074 + AZOBR_RS30390 0.87 +0.7 165,074 + AZOBR_RS30390 0.87 -3.2 165,074 + AZOBR_RS30390 0.87 +0.7 165,075 - AZOBR_RS30390 0.87 +0.0 165,263 + -0.5 165,359 + -0.3 165,359 + -0.5 165,491 + AZOBR_RS30395 0.11 +0.2 165,701 + AZOBR_RS30395 0.24 +0.8 165,824 + AZOBR_RS30395 0.31 +0.4 165,824 + AZOBR_RS30395 0.31 -0.6 165,825 - AZOBR_RS30395 0.31 -3.6 165,825 - AZOBR_RS30395 0.31 -0.8 165,825 - AZOBR_RS30395 0.31 -2.5 165,825 - AZOBR_RS30395 0.31 -0.0 165,905 + AZOBR_RS30395 0.36 -0.3 165,905 + AZOBR_RS30395 0.36 +0.6 165,906 - AZOBR_RS30395 0.36 +0.4 165,989 + AZOBR_RS30395 0.41 +0.3 165,989 + AZOBR_RS30395 0.41 +0.4 165,989 + AZOBR_RS30395 0.41 -1.0 165,990 - AZOBR_RS30395 0.41 +0.7 166,001 + AZOBR_RS30395 0.41 -2.4 166,002 - AZOBR_RS30395 0.42 +0.7
Or see this region's nucleotide sequence