Experiment: Paraquat dichloride 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS30380 and AZOBR_RS30385 are separated by 10 nucleotides AZOBR_RS30385 and AZOBR_RS30390 are separated by 13 nucleotides
AZOBR_RS30380: AZOBR_RS30380 - histidine kinase, at 161,564 to 162,280
_RS30380
AZOBR_RS30385: AZOBR_RS30385 - Fis family transcriptional regulator, at 162,291 to 163,634
_RS30385
AZOBR_RS30390: AZOBR_RS30390 - aspartate aminotransferase, at 163,648 to 165,279
_RS30390
Position (kb) 162
163
164 Strain fitness (log2 ratio) -2
-1
0
1
2 at 161.673 kb on - strand, within AZOBR_RS30380 at 162.188 kb on + strand, within AZOBR_RS30380 at 162.189 kb on - strand, within AZOBR_RS30380 at 162.189 kb on - strand, within AZOBR_RS30380 at 162.577 kb on - strand, within AZOBR_RS30385 at 163.188 kb on + strand, within AZOBR_RS30385 at 163.188 kb on + strand, within AZOBR_RS30385 at 163.189 kb on - strand, within AZOBR_RS30385 at 163.189 kb on - strand, within AZOBR_RS30385 at 163.189 kb on - strand, within AZOBR_RS30385 at 163.581 kb on + strand at 163.581 kb on + strand at 163.581 kb on + strand at 163.582 kb on - strand at 163.763 kb on + strand at 163.908 kb on - strand, within AZOBR_RS30390 at 163.908 kb on - strand, within AZOBR_RS30390 at 163.908 kb on - strand, within AZOBR_RS30390 at 163.919 kb on + strand, within AZOBR_RS30390 at 163.958 kb on + strand, within AZOBR_RS30390 at 163.958 kb on + strand, within AZOBR_RS30390 at 163.958 kb on + strand, within AZOBR_RS30390 at 163.958 kb on + strand, within AZOBR_RS30390 at 163.959 kb on - strand, within AZOBR_RS30390 at 163.959 kb on - strand, within AZOBR_RS30390 at 163.961 kb on + strand, within AZOBR_RS30390 at 163.961 kb on + strand, within AZOBR_RS30390 at 163.961 kb on + strand, within AZOBR_RS30390 at 163.961 kb on + strand, within AZOBR_RS30390 at 163.962 kb on - strand, within AZOBR_RS30390 at 163.962 kb on - strand, within AZOBR_RS30390 at 163.962 kb on - strand, within AZOBR_RS30390 at 164.058 kb on - strand, within AZOBR_RS30390 at 164.220 kb on - strand, within AZOBR_RS30390 at 164.333 kb on + strand, within AZOBR_RS30390 at 164.348 kb on + strand, within AZOBR_RS30390 at 164.415 kb on - strand, within AZOBR_RS30390 at 164.634 kb on - strand, within AZOBR_RS30390
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.02 mg/ml remove 161,673 - AZOBR_RS30380 0.15 -2.2 162,188 + AZOBR_RS30380 0.87 -0.6 162,189 - AZOBR_RS30380 0.87 -0.1 162,189 - AZOBR_RS30380 0.87 +0.3 162,577 - AZOBR_RS30385 0.21 +0.8 163,188 + AZOBR_RS30385 0.67 +0.1 163,188 + AZOBR_RS30385 0.67 -0.1 163,189 - AZOBR_RS30385 0.67 +0.1 163,189 - AZOBR_RS30385 0.67 +0.3 163,189 - AZOBR_RS30385 0.67 -0.6 163,581 + +0.9 163,581 + +0.1 163,581 + -0.2 163,582 - +0.7 163,763 + -0.2 163,908 - AZOBR_RS30390 0.16 -0.2 163,908 - AZOBR_RS30390 0.16 -0.2 163,908 - AZOBR_RS30390 0.16 -1.4 163,919 + AZOBR_RS30390 0.17 +2.5 163,958 + AZOBR_RS30390 0.19 -0.1 163,958 + AZOBR_RS30390 0.19 -0.7 163,958 + AZOBR_RS30390 0.19 -0.3 163,958 + AZOBR_RS30390 0.19 -0.2 163,959 - AZOBR_RS30390 0.19 +0.5 163,959 - AZOBR_RS30390 0.19 -1.8 163,961 + AZOBR_RS30390 0.19 -0.6 163,961 + AZOBR_RS30390 0.19 +0.9 163,961 + AZOBR_RS30390 0.19 -0.5 163,961 + AZOBR_RS30390 0.19 -0.1 163,962 - AZOBR_RS30390 0.19 -1.4 163,962 - AZOBR_RS30390 0.19 -1.8 163,962 - AZOBR_RS30390 0.19 -1.2 164,058 - AZOBR_RS30390 0.25 -0.5 164,220 - AZOBR_RS30390 0.35 -0.2 164,333 + AZOBR_RS30390 0.42 -0.7 164,348 + AZOBR_RS30390 0.43 +0.4 164,415 - AZOBR_RS30390 0.47 +0.4 164,634 - AZOBR_RS30390 0.60 +0.9
Or see this region's nucleotide sequence