Experiment: Paraquat dichloride 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS30145 and AZOBR_RS30150 are separated by 80 nucleotides AZOBR_RS30150 and AZOBR_RS30155 are separated by 171 nucleotides
AZOBR_RS30145: AZOBR_RS30145 - formate transporter, at 102,172 to 103,041
_RS30145
AZOBR_RS30150: AZOBR_RS30150 - pyruvate formate lyase-activating protein, at 103,122 to 103,889
_RS30150
AZOBR_RS30155: AZOBR_RS30155 - pyruvate kinase, at 104,061 to 105,494
_RS30155
Position (kb) 103
104 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 102.148 kb on + strand at 102.216 kb on - strand at 102.380 kb on + strand, within AZOBR_RS30145 at 102.381 kb on - strand, within AZOBR_RS30145 at 102.381 kb on - strand, within AZOBR_RS30145 at 102.381 kb on - strand, within AZOBR_RS30145 at 102.381 kb on - strand, within AZOBR_RS30145 at 102.572 kb on + strand, within AZOBR_RS30145 at 102.572 kb on + strand, within AZOBR_RS30145 at 102.572 kb on + strand, within AZOBR_RS30145 at 102.572 kb on + strand, within AZOBR_RS30145 at 102.573 kb on - strand, within AZOBR_RS30145 at 102.611 kb on + strand, within AZOBR_RS30145 at 102.941 kb on + strand, within AZOBR_RS30145 at 103.357 kb on + strand, within AZOBR_RS30150 at 103.357 kb on + strand, within AZOBR_RS30150 at 103.357 kb on + strand, within AZOBR_RS30150 at 103.358 kb on - strand, within AZOBR_RS30150 at 103.358 kb on - strand, within AZOBR_RS30150 at 103.444 kb on + strand, within AZOBR_RS30150 at 103.579 kb on + strand, within AZOBR_RS30150 at 103.580 kb on - strand, within AZOBR_RS30150 at 103.666 kb on + strand at 103.747 kb on + strand, within AZOBR_RS30150 at 103.747 kb on + strand, within AZOBR_RS30150 at 103.787 kb on - strand, within AZOBR_RS30150 at 103.787 kb on - strand at 103.787 kb on - strand, within AZOBR_RS30150 at 103.964 kb on + strand at 103.964 kb on + strand at 103.964 kb on + strand at 103.964 kb on + strand at 103.964 kb on + strand at 103.965 kb on - strand at 103.965 kb on - strand at 103.965 kb on - strand at 104.347 kb on + strand, within AZOBR_RS30155 at 104.348 kb on - strand, within AZOBR_RS30155
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.02 mg/ml remove 102,148 + -1.2 102,216 - -0.7 102,380 + AZOBR_RS30145 0.24 -1.5 102,381 - AZOBR_RS30145 0.24 +1.0 102,381 - AZOBR_RS30145 0.24 -0.4 102,381 - AZOBR_RS30145 0.24 -1.3 102,381 - AZOBR_RS30145 0.24 +1.5 102,572 + AZOBR_RS30145 0.46 -2.8 102,572 + AZOBR_RS30145 0.46 +0.4 102,572 + AZOBR_RS30145 0.46 -2.2 102,572 + AZOBR_RS30145 0.46 -0.7 102,573 - AZOBR_RS30145 0.46 +0.5 102,611 + AZOBR_RS30145 0.50 -0.0 102,941 + AZOBR_RS30145 0.88 -0.2 103,357 + AZOBR_RS30150 0.31 +0.7 103,357 + AZOBR_RS30150 0.31 +0.4 103,357 + AZOBR_RS30150 0.31 +0.6 103,358 - AZOBR_RS30150 0.31 -0.8 103,358 - AZOBR_RS30150 0.31 -0.4 103,444 + AZOBR_RS30150 0.42 -0.3 103,579 + AZOBR_RS30150 0.60 -2.4 103,580 - AZOBR_RS30150 0.60 +0.0 103,666 + +1.1 103,747 + AZOBR_RS30150 0.81 +0.6 103,747 + AZOBR_RS30150 0.81 +0.5 103,787 - AZOBR_RS30150 0.87 +1.2 103,787 - +1.1 103,787 - AZOBR_RS30150 0.87 +0.5 103,964 + -0.1 103,964 + -1.2 103,964 + +0.2 103,964 + -1.2 103,964 + +0.3 103,965 - -0.4 103,965 - -1.3 103,965 - +0.4 104,347 + AZOBR_RS30155 0.20 -0.4 104,348 - AZOBR_RS30155 0.20 +1.2
Or see this region's nucleotide sequence