Experiment: Paraquat dichloride 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS29535 and AZOBR_RS29540 overlap by 4 nucleotides AZOBR_RS29540 and AZOBR_RS29545 are separated by 157 nucleotides
AZOBR_RS29535: AZOBR_RS29535 - enterobactin exporter, at 748,058 to 749,308
_RS29535
AZOBR_RS29540: AZOBR_RS29540 - putative auxiliary transport protein MFP family, at 749,305 to 750,390
_RS29540
AZOBR_RS29545: AZOBR_RS29545 - acriflavin resistance protein, at 750,548 to 753,712
_RS29545
Position (kb) 749
750
751 Strain fitness (log2 ratio) -2
-1
0
1
2 at 748.397 kb on + strand, within AZOBR_RS29535 at 748.397 kb on + strand, within AZOBR_RS29535 at 748.397 kb on + strand, within AZOBR_RS29535 at 748.398 kb on - strand, within AZOBR_RS29535 at 748.398 kb on - strand, within AZOBR_RS29535 at 748.398 kb on - strand, within AZOBR_RS29535 at 748.398 kb on - strand, within AZOBR_RS29535 at 748.398 kb on - strand, within AZOBR_RS29535 at 748.592 kb on + strand, within AZOBR_RS29535 at 748.592 kb on + strand, within AZOBR_RS29535 at 748.593 kb on - strand, within AZOBR_RS29535 at 748.593 kb on - strand, within AZOBR_RS29535 at 748.850 kb on + strand, within AZOBR_RS29535 at 748.850 kb on + strand, within AZOBR_RS29535 at 748.851 kb on - strand, within AZOBR_RS29535 at 748.851 kb on - strand, within AZOBR_RS29535 at 748.851 kb on - strand, within AZOBR_RS29535 at 748.851 kb on - strand, within AZOBR_RS29535 at 748.851 kb on - strand, within AZOBR_RS29535 at 748.994 kb on + strand, within AZOBR_RS29535 at 748.994 kb on + strand, within AZOBR_RS29535 at 748.995 kb on - strand, within AZOBR_RS29535 at 748.995 kb on - strand, within AZOBR_RS29535 at 748.995 kb on - strand, within AZOBR_RS29535 at 748.995 kb on - strand, within AZOBR_RS29535 at 749.057 kb on + strand, within AZOBR_RS29535 at 749.057 kb on + strand, within AZOBR_RS29535 at 749.058 kb on - strand, within AZOBR_RS29535 at 749.391 kb on - strand at 749.849 kb on + strand, within AZOBR_RS29540 at 750.457 kb on + strand at 750.493 kb on + strand at 750.493 kb on + strand at 750.494 kb on - strand at 750.749 kb on + strand at 751.229 kb on + strand, within AZOBR_RS29545 at 751.229 kb on + strand, within AZOBR_RS29545 at 751.229 kb on + strand, within AZOBR_RS29545
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.02 mg/ml remove 748,397 + AZOBR_RS29535 0.27 -0.5 748,397 + AZOBR_RS29535 0.27 +1.1 748,397 + AZOBR_RS29535 0.27 -0.9 748,398 - AZOBR_RS29535 0.27 -0.6 748,398 - AZOBR_RS29535 0.27 +0.7 748,398 - AZOBR_RS29535 0.27 +1.9 748,398 - AZOBR_RS29535 0.27 +1.3 748,398 - AZOBR_RS29535 0.27 +0.0 748,592 + AZOBR_RS29535 0.43 +0.3 748,592 + AZOBR_RS29535 0.43 +1.3 748,593 - AZOBR_RS29535 0.43 -0.4 748,593 - AZOBR_RS29535 0.43 +0.4 748,850 + AZOBR_RS29535 0.63 -2.3 748,850 + AZOBR_RS29535 0.63 +0.4 748,851 - AZOBR_RS29535 0.63 +0.2 748,851 - AZOBR_RS29535 0.63 +0.3 748,851 - AZOBR_RS29535 0.63 +0.1 748,851 - AZOBR_RS29535 0.63 -0.3 748,851 - AZOBR_RS29535 0.63 -0.2 748,994 + AZOBR_RS29535 0.75 -0.5 748,994 + AZOBR_RS29535 0.75 -2.5 748,995 - AZOBR_RS29535 0.75 -1.0 748,995 - AZOBR_RS29535 0.75 -0.2 748,995 - AZOBR_RS29535 0.75 -2.3 748,995 - AZOBR_RS29535 0.75 -0.7 749,057 + AZOBR_RS29535 0.80 +0.5 749,057 + AZOBR_RS29535 0.80 +0.5 749,058 - AZOBR_RS29535 0.80 +0.7 749,391 - +0.8 749,849 + AZOBR_RS29540 0.50 +0.7 750,457 + +0.5 750,493 + -2.6 750,493 + -0.7 750,494 - -0.8 750,749 + -2.1 751,229 + AZOBR_RS29545 0.22 -0.2 751,229 + AZOBR_RS29545 0.22 +1.1 751,229 + AZOBR_RS29545 0.22 +1.4
Or see this region's nucleotide sequence