Experiment: Paraquat dichloride 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS29420 and AZOBR_RS29425 are separated by 519 nucleotides AZOBR_RS29425 and AZOBR_RS29430 are separated by 16 nucleotides AZOBR_RS29430 and AZOBR_RS29435 overlap by 4 nucleotides
AZOBR_RS29420: AZOBR_RS29420 - nitrilase, at 721,121 to 722,050
_RS29420
AZOBR_RS29425: AZOBR_RS29425 - hypothetical protein, at 722,570 to 723,424
_RS29425
AZOBR_RS29430: AZOBR_RS29430 - hemin ABC transporter substrate-binding protein, at 723,441 to 724,316
_RS29430
AZOBR_RS29435: AZOBR_RS29435 - hemin ABC transporter permease, at 724,313 to 725,422
_RS29435
Position (kb) 722
723
724 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 721.622 kb on + strand, within AZOBR_RS29420 at 721.622 kb on + strand, within AZOBR_RS29420 at 721.622 kb on + strand, within AZOBR_RS29420 at 721.622 kb on + strand, within AZOBR_RS29420 at 721.622 kb on + strand, within AZOBR_RS29420 at 721.623 kb on - strand, within AZOBR_RS29420 at 721.623 kb on - strand, within AZOBR_RS29420 at 721.623 kb on - strand, within AZOBR_RS29420 at 721.623 kb on - strand, within AZOBR_RS29420 at 721.623 kb on - strand, within AZOBR_RS29420 at 721.623 kb on - strand, within AZOBR_RS29420 at 721.623 kb on - strand, within AZOBR_RS29420 at 721.647 kb on - strand, within AZOBR_RS29420 at 721.647 kb on - strand, within AZOBR_RS29420 at 721.649 kb on + strand, within AZOBR_RS29420 at 721.650 kb on - strand, within AZOBR_RS29420 at 722.143 kb on - strand at 722.235 kb on + strand at 722.235 kb on + strand at 722.235 kb on + strand at 722.235 kb on + strand at 722.276 kb on - strand at 723.305 kb on + strand, within AZOBR_RS29425 at 723.306 kb on - strand, within AZOBR_RS29425 at 723.306 kb on - strand, within AZOBR_RS29425 at 723.651 kb on + strand, within AZOBR_RS29430 at 723.651 kb on + strand, within AZOBR_RS29430 at 723.651 kb on + strand, within AZOBR_RS29430 at 723.652 kb on - strand, within AZOBR_RS29430 at 724.062 kb on + strand, within AZOBR_RS29430 at 724.062 kb on + strand, within AZOBR_RS29430 at 724.062 kb on + strand, within AZOBR_RS29430 at 724.063 kb on - strand, within AZOBR_RS29430
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.02 mg/ml remove 721,622 + AZOBR_RS29420 0.54 +0.2 721,622 + AZOBR_RS29420 0.54 +0.5 721,622 + AZOBR_RS29420 0.54 +2.4 721,622 + AZOBR_RS29420 0.54 +0.4 721,622 + AZOBR_RS29420 0.54 +0.1 721,623 - AZOBR_RS29420 0.54 -1.3 721,623 - AZOBR_RS29420 0.54 +0.4 721,623 - AZOBR_RS29420 0.54 +1.0 721,623 - AZOBR_RS29420 0.54 -0.7 721,623 - AZOBR_RS29420 0.54 +0.0 721,623 - AZOBR_RS29420 0.54 +1.2 721,623 - AZOBR_RS29420 0.54 -0.8 721,647 - AZOBR_RS29420 0.57 -3.3 721,647 - AZOBR_RS29420 0.57 +0.7 721,649 + AZOBR_RS29420 0.57 +0.3 721,650 - AZOBR_RS29420 0.57 +1.1 722,143 - +1.4 722,235 + +0.3 722,235 + -1.2 722,235 + -2.2 722,235 + +0.5 722,276 - -2.8 723,305 + AZOBR_RS29425 0.86 -0.1 723,306 - AZOBR_RS29425 0.86 -2.4 723,306 - AZOBR_RS29425 0.86 -3.7 723,651 + AZOBR_RS29430 0.24 -1.0 723,651 + AZOBR_RS29430 0.24 -1.8 723,651 + AZOBR_RS29430 0.24 +0.8 723,652 - AZOBR_RS29430 0.24 +0.5 724,062 + AZOBR_RS29430 0.71 -2.4 724,062 + AZOBR_RS29430 0.71 +0.3 724,062 + AZOBR_RS29430 0.71 +0.6 724,063 - AZOBR_RS29430 0.71 +0.1
Or see this region's nucleotide sequence