Experiment: Paraquat dichloride 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS29410 and AZOBR_RS29415 are separated by 71 nucleotides AZOBR_RS29415 and AZOBR_RS29420 overlap by 4 nucleotides AZOBR_RS29420 and AZOBR_RS29425 are separated by 519 nucleotides
AZOBR_RS29410: AZOBR_RS29410 - sulfonate ABC transporter substrate-binding protein, at 719,278 to 720,351
_RS29410
AZOBR_RS29415: AZOBR_RS29415 - hypothetical protein, at 720,423 to 721,124
_RS29415
AZOBR_RS29420: AZOBR_RS29420 - nitrilase, at 721,121 to 722,050
_RS29420
AZOBR_RS29425: AZOBR_RS29425 - hypothetical protein, at 722,570 to 723,424
_RS29425
Position (kb) 721
722
723 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 720.128 kb on - strand, within AZOBR_RS29410 at 720.430 kb on + strand at 720.431 kb on - strand at 720.431 kb on - strand at 720.588 kb on + strand, within AZOBR_RS29415 at 720.588 kb on + strand, within AZOBR_RS29415 at 721.341 kb on - strand, within AZOBR_RS29420 at 721.457 kb on + strand, within AZOBR_RS29420 at 721.457 kb on + strand, within AZOBR_RS29420 at 721.458 kb on - strand, within AZOBR_RS29420 at 721.458 kb on - strand, within AZOBR_RS29420 at 721.458 kb on - strand, within AZOBR_RS29420 at 721.458 kb on - strand, within AZOBR_RS29420 at 721.472 kb on + strand, within AZOBR_RS29420 at 721.473 kb on - strand, within AZOBR_RS29420 at 721.473 kb on - strand, within AZOBR_RS29420 at 721.473 kb on - strand, within AZOBR_RS29420 at 721.622 kb on + strand, within AZOBR_RS29420 at 721.622 kb on + strand, within AZOBR_RS29420 at 721.622 kb on + strand, within AZOBR_RS29420 at 721.622 kb on + strand, within AZOBR_RS29420 at 721.622 kb on + strand, within AZOBR_RS29420 at 721.623 kb on - strand, within AZOBR_RS29420 at 721.623 kb on - strand, within AZOBR_RS29420 at 721.623 kb on - strand, within AZOBR_RS29420 at 721.623 kb on - strand, within AZOBR_RS29420 at 721.623 kb on - strand, within AZOBR_RS29420 at 721.623 kb on - strand, within AZOBR_RS29420 at 721.623 kb on - strand, within AZOBR_RS29420 at 721.647 kb on - strand, within AZOBR_RS29420 at 721.647 kb on - strand, within AZOBR_RS29420 at 721.649 kb on + strand, within AZOBR_RS29420 at 721.650 kb on - strand, within AZOBR_RS29420 at 722.143 kb on - strand at 722.235 kb on + strand at 722.235 kb on + strand at 722.235 kb on + strand at 722.235 kb on + strand at 722.276 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.02 mg/ml remove 720,128 - AZOBR_RS29410 0.79 -1.2 720,430 + -2.2 720,431 - -2.6 720,431 - -0.7 720,588 + AZOBR_RS29415 0.24 -1.1 720,588 + AZOBR_RS29415 0.24 +0.1 721,341 - AZOBR_RS29420 0.24 -0.3 721,457 + AZOBR_RS29420 0.36 +0.6 721,457 + AZOBR_RS29420 0.36 +0.8 721,458 - AZOBR_RS29420 0.36 -1.9 721,458 - AZOBR_RS29420 0.36 -2.8 721,458 - AZOBR_RS29420 0.36 -0.2 721,458 - AZOBR_RS29420 0.36 -0.0 721,472 + AZOBR_RS29420 0.38 -3.7 721,473 - AZOBR_RS29420 0.38 -0.1 721,473 - AZOBR_RS29420 0.38 +0.4 721,473 - AZOBR_RS29420 0.38 +3.3 721,622 + AZOBR_RS29420 0.54 +0.2 721,622 + AZOBR_RS29420 0.54 +0.5 721,622 + AZOBR_RS29420 0.54 +2.4 721,622 + AZOBR_RS29420 0.54 +0.4 721,622 + AZOBR_RS29420 0.54 +0.1 721,623 - AZOBR_RS29420 0.54 -1.3 721,623 - AZOBR_RS29420 0.54 +0.4 721,623 - AZOBR_RS29420 0.54 +1.0 721,623 - AZOBR_RS29420 0.54 -0.7 721,623 - AZOBR_RS29420 0.54 +0.0 721,623 - AZOBR_RS29420 0.54 +1.2 721,623 - AZOBR_RS29420 0.54 -0.8 721,647 - AZOBR_RS29420 0.57 -3.3 721,647 - AZOBR_RS29420 0.57 +0.7 721,649 + AZOBR_RS29420 0.57 +0.3 721,650 - AZOBR_RS29420 0.57 +1.1 722,143 - +1.4 722,235 + +0.3 722,235 + -1.2 722,235 + -2.2 722,235 + +0.5 722,276 - -2.8
Or see this region's nucleotide sequence