Experiment: Paraquat dichloride 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS27565 and AZOBR_RS27570 are separated by 84 nucleotides AZOBR_RS27570 and AZOBR_RS27575 are separated by 51 nucleotides AZOBR_RS27575 and AZOBR_RS27580 are separated by 15 nucleotides AZOBR_RS27580 and AZOBR_RS27585 are separated by 40 nucleotides
AZOBR_RS27565: AZOBR_RS27565 - GntR family transcriptional regulator, at 345,649 to 347,049
_RS27565
AZOBR_RS27570: AZOBR_RS27570 - MerR family transcriptional regulator, at 347,134 to 347,565
_RS27570
AZOBR_RS27575: AZOBR_RS27575 - arsenic resistance protein, at 347,617 to 348,579
_RS27575
AZOBR_RS27580: AZOBR_RS27580 - oxidoreductase, at 348,595 to 349,296
_RS27580
AZOBR_RS27585: AZOBR_RS27585 - ABC transporter substrate-binding protein, at 349,337 to 350,422
_RS27585
Position (kb) 347
348
349 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 346.846 kb on + strand, within AZOBR_RS27565 at 346.846 kb on + strand, within AZOBR_RS27565 at 346.846 kb on + strand, within AZOBR_RS27565 at 346.890 kb on - strand, within AZOBR_RS27565 at 346.966 kb on + strand at 346.966 kb on + strand at 347.047 kb on + strand at 347.048 kb on - strand at 347.052 kb on + strand at 347.206 kb on + strand, within AZOBR_RS27570 at 347.207 kb on - strand, within AZOBR_RS27570 at 347.254 kb on + strand, within AZOBR_RS27570 at 347.254 kb on + strand, within AZOBR_RS27570 at 347.761 kb on + strand, within AZOBR_RS27575 at 347.762 kb on - strand, within AZOBR_RS27575 at 347.956 kb on + strand, within AZOBR_RS27575 at 347.957 kb on - strand, within AZOBR_RS27575 at 347.957 kb on - strand, within AZOBR_RS27575 at 348.056 kb on - strand, within AZOBR_RS27575 at 348.325 kb on + strand, within AZOBR_RS27575 at 348.541 kb on + strand at 348.541 kb on + strand at 348.542 kb on - strand at 348.542 kb on - strand at 349.347 kb on + strand at 349.347 kb on + strand at 349.347 kb on + strand at 349.348 kb on - strand at 349.348 kb on - strand at 349.348 kb on - strand at 349.348 kb on - strand at 349.348 kb on - strand at 349.348 kb on - strand at 349.348 kb on - strand at 349.416 kb on + strand at 349.416 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.02 mg/ml remove 346,846 + AZOBR_RS27565 0.85 +0.9 346,846 + AZOBR_RS27565 0.85 -3.8 346,846 + AZOBR_RS27565 0.85 -0.1 346,890 - AZOBR_RS27565 0.89 +1.3 346,966 + +0.2 346,966 + +0.4 347,047 + -1.3 347,048 - -0.1 347,052 + +1.0 347,206 + AZOBR_RS27570 0.17 -1.0 347,207 - AZOBR_RS27570 0.17 -2.7 347,254 + AZOBR_RS27570 0.28 -0.1 347,254 + AZOBR_RS27570 0.28 -0.0 347,761 + AZOBR_RS27575 0.15 +0.3 347,762 - AZOBR_RS27575 0.15 +0.9 347,956 + AZOBR_RS27575 0.35 -0.7 347,957 - AZOBR_RS27575 0.35 -1.8 347,957 - AZOBR_RS27575 0.35 -1.7 348,056 - AZOBR_RS27575 0.46 -0.1 348,325 + AZOBR_RS27575 0.74 -3.0 348,541 + +0.1 348,541 + -1.0 348,542 - -0.5 348,542 - -0.4 349,347 + +0.3 349,347 + +1.3 349,347 + +0.8 349,348 - -0.8 349,348 - -0.5 349,348 - -3.7 349,348 - -0.5 349,348 - +0.2 349,348 - +0.6 349,348 - -0.1 349,416 + +0.6 349,416 + -0.5
Or see this region's nucleotide sequence