Experiment: Paraquat dichloride 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS27120 and AZOBR_RS27125 are separated by 38 nucleotides AZOBR_RS27125 and AZOBR_RS27130 are separated by 35 nucleotides AZOBR_RS27130 and AZOBR_RS27135 are separated by 56 nucleotides AZOBR_RS27135 and AZOBR_RS27140 are separated by 102 nucleotides
AZOBR_RS27120: AZOBR_RS27120 - FAD-dependent oxidoreductase, at 230,227 to 231,354
_RS27120
AZOBR_RS27125: AZOBR_RS27125 - endoribonuclease, at 231,393 to 231,755
_RS27125
AZOBR_RS27130: AZOBR_RS27130 - polyamine ABC transporter substrate-binding protein, at 231,791 to 232,570
_RS27130
AZOBR_RS27135: AZOBR_RS27135 - endoribonuclease L-PSP, at 232,627 to 232,974
_RS27135
AZOBR_RS27140: AZOBR_RS27140 - membrane protein, at 233,077 to 233,748
_RS27140
Position (kb) 231
232
233 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 231.459 kb on + strand, within AZOBR_RS27125 at 231.606 kb on + strand, within AZOBR_RS27125 at 231.607 kb on - strand, within AZOBR_RS27125 at 231.764 kb on + strand at 231.773 kb on - strand at 232.121 kb on + strand, within AZOBR_RS27130 at 232.121 kb on + strand, within AZOBR_RS27130 at 232.121 kb on + strand, within AZOBR_RS27130 at 232.121 kb on + strand, within AZOBR_RS27130 at 232.121 kb on + strand, within AZOBR_RS27130 at 232.121 kb on + strand, within AZOBR_RS27130 at 232.122 kb on - strand, within AZOBR_RS27130 at 232.122 kb on - strand, within AZOBR_RS27130 at 232.131 kb on + strand, within AZOBR_RS27130 at 232.139 kb on + strand, within AZOBR_RS27130 at 232.140 kb on - strand, within AZOBR_RS27130 at 232.277 kb on + strand, within AZOBR_RS27130 at 232.277 kb on + strand, within AZOBR_RS27130 at 232.277 kb on + strand, within AZOBR_RS27130 at 232.278 kb on - strand, within AZOBR_RS27130 at 232.544 kb on + strand at 232.544 kb on + strand at 232.545 kb on - strand at 232.545 kb on - strand at 232.602 kb on - strand at 233.135 kb on + strand at 233.135 kb on + strand at 233.136 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.02 mg/ml remove 231,459 + AZOBR_RS27125 0.18 +0.4 231,606 + AZOBR_RS27125 0.59 +0.3 231,607 - AZOBR_RS27125 0.59 -1.0 231,764 + -0.1 231,773 - -0.6 232,121 + AZOBR_RS27130 0.42 -1.8 232,121 + AZOBR_RS27130 0.42 +0.0 232,121 + AZOBR_RS27130 0.42 -0.7 232,121 + AZOBR_RS27130 0.42 -0.5 232,121 + AZOBR_RS27130 0.42 -0.2 232,121 + AZOBR_RS27130 0.42 +0.1 232,122 - AZOBR_RS27130 0.42 -0.6 232,122 - AZOBR_RS27130 0.42 -0.6 232,131 + AZOBR_RS27130 0.44 -0.3 232,139 + AZOBR_RS27130 0.45 -2.1 232,140 - AZOBR_RS27130 0.45 -3.6 232,277 + AZOBR_RS27130 0.62 -0.7 232,277 + AZOBR_RS27130 0.62 -0.3 232,277 + AZOBR_RS27130 0.62 +0.3 232,278 - AZOBR_RS27130 0.62 -0.1 232,544 + +0.6 232,544 + -2.0 232,545 - +2.9 232,545 - -4.0 232,602 - -1.2 233,135 + -0.7 233,135 + +0.4 233,136 - +0.7
Or see this region's nucleotide sequence