Experiment: Paraquat dichloride 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS25670 and AZOBR_RS25675 are separated by 12 nucleotides AZOBR_RS25675 and AZOBR_RS25680 are separated by 129 nucleotides AZOBR_RS25680 and AZOBR_RS25685 are separated by 97 nucleotides AZOBR_RS25685 and AZOBR_RS25690 are separated by 51 nucleotides
AZOBR_RS25670: AZOBR_RS25670 - long-chain fatty acid--CoA ligase, at 806,535 to 809,945
_RS25670
AZOBR_RS25675: AZOBR_RS25675 - O-methyltransferase, at 809,958 to 810,551
_RS25675
AZOBR_RS25680: AZOBR_RS25680 - hypothetical protein, at 810,681 to 811,502
_RS25680
AZOBR_RS25685: AZOBR_RS25685 - hypothetical protein, at 811,600 to 811,965
_RS25685
AZOBR_RS25690: AZOBR_RS25690 - signal peptide protein, at 812,017 to 812,706
_RS25690
Position (kb) 810
811
812 Strain fitness (log2 ratio) -2
-1
0
1 at 809.893 kb on - strand at 810.044 kb on - strand, within AZOBR_RS25675 at 810.502 kb on + strand at 810.503 kb on - strand at 810.503 kb on - strand at 810.503 kb on - strand at 810.503 kb on - strand at 810.743 kb on - strand at 810.743 kb on - strand at 810.751 kb on + strand at 810.802 kb on + strand, within AZOBR_RS25680 at 810.802 kb on + strand, within AZOBR_RS25680 at 811.283 kb on + strand, within AZOBR_RS25680 at 811.283 kb on + strand, within AZOBR_RS25680 at 811.284 kb on - strand, within AZOBR_RS25680 at 811.284 kb on - strand, within AZOBR_RS25680 at 811.321 kb on + strand, within AZOBR_RS25680 at 811.321 kb on + strand, within AZOBR_RS25680 at 811.322 kb on - strand, within AZOBR_RS25680 at 811.630 kb on + strand at 811.631 kb on - strand at 811.642 kb on + strand, within AZOBR_RS25685 at 811.643 kb on - strand, within AZOBR_RS25685 at 811.643 kb on - strand, within AZOBR_RS25685 at 811.870 kb on + strand, within AZOBR_RS25685 at 811.871 kb on - strand, within AZOBR_RS25685 at 811.871 kb on - strand at 811.871 kb on - strand, within AZOBR_RS25685 at 812.180 kb on + strand, within AZOBR_RS25690 at 812.181 kb on - strand, within AZOBR_RS25690 at 812.181 kb on - strand, within AZOBR_RS25690 at 812.181 kb on - strand, within AZOBR_RS25690 at 812.441 kb on + strand, within AZOBR_RS25690 at 812.442 kb on - strand, within AZOBR_RS25690 at 812.442 kb on - strand, within AZOBR_RS25690
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.02 mg/ml remove 809,893 - -0.3 810,044 - AZOBR_RS25675 0.14 -0.3 810,502 + -0.2 810,503 - +0.7 810,503 - -2.3 810,503 - -0.6 810,503 - +0.5 810,743 - -0.6 810,743 - +0.1 810,751 + +0.2 810,802 + AZOBR_RS25680 0.15 -0.1 810,802 + AZOBR_RS25680 0.15 +0.2 811,283 + AZOBR_RS25680 0.73 -0.3 811,283 + AZOBR_RS25680 0.73 -0.8 811,284 - AZOBR_RS25680 0.73 -0.3 811,284 - AZOBR_RS25680 0.73 +0.4 811,321 + AZOBR_RS25680 0.78 -0.2 811,321 + AZOBR_RS25680 0.78 -0.4 811,322 - AZOBR_RS25680 0.78 +0.5 811,630 + -0.1 811,631 - -0.1 811,642 + AZOBR_RS25685 0.11 +0.0 811,643 - AZOBR_RS25685 0.12 -1.1 811,643 - AZOBR_RS25685 0.12 +0.1 811,870 + AZOBR_RS25685 0.74 +0.2 811,871 - AZOBR_RS25685 0.74 +0.6 811,871 - +0.0 811,871 - AZOBR_RS25685 0.74 -2.4 812,180 + AZOBR_RS25690 0.24 -1.4 812,181 - AZOBR_RS25690 0.24 +0.0 812,181 - AZOBR_RS25690 0.24 -2.4 812,181 - AZOBR_RS25690 0.24 -0.1 812,441 + AZOBR_RS25690 0.61 +0.0 812,442 - AZOBR_RS25690 0.62 +0.4 812,442 - AZOBR_RS25690 0.62 -0.3
Or see this region's nucleotide sequence