Experiment: Paraquat dichloride 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS23575 and AZOBR_RS23580 are separated by 221 nucleotides AZOBR_RS23580 and AZOBR_RS23585 are separated by 91 nucleotides AZOBR_RS23585 and AZOBR_RS23590 overlap by 11 nucleotides
AZOBR_RS23575: AZOBR_RS23575 - ABC transporter, at 320,464 to 321,519
_RS23575
AZOBR_RS23580: AZOBR_RS23580 - membrane protein, at 321,741 to 322,877
_RS23580
AZOBR_RS23585: AZOBR_RS23585 - hypothetical protein, at 322,969 to 323,829
_RS23585
AZOBR_RS23590: AZOBR_RS23590 - chromosome partitioning protein, at 323,819 to 324,853
_RS23590
Position (kb) 321
322
323 Strain fitness (log2 ratio) -2
-1
0
1 at 320.941 kb on + strand, within AZOBR_RS23575 at 320.941 kb on + strand, within AZOBR_RS23575 at 320.941 kb on + strand, within AZOBR_RS23575 at 320.941 kb on + strand, within AZOBR_RS23575 at 320.942 kb on - strand, within AZOBR_RS23575 at 321.365 kb on - strand, within AZOBR_RS23575 at 321.365 kb on - strand, within AZOBR_RS23575 at 321.649 kb on + strand at 322.192 kb on - strand, within AZOBR_RS23580 at 322.211 kb on + strand, within AZOBR_RS23580 at 322.212 kb on - strand, within AZOBR_RS23580 at 323.418 kb on - strand, within AZOBR_RS23585 at 323.510 kb on + strand, within AZOBR_RS23585 at 323.510 kb on + strand, within AZOBR_RS23585 at 323.511 kb on - strand, within AZOBR_RS23585 at 323.511 kb on - strand, within AZOBR_RS23585 at 323.511 kb on - strand, within AZOBR_RS23585 at 323.511 kb on - strand, within AZOBR_RS23585 at 323.511 kb on - strand, within AZOBR_RS23585 at 323.511 kb on - strand, within AZOBR_RS23585 at 323.821 kb on - strand at 323.855 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.02 mg/ml remove 320,941 + AZOBR_RS23575 0.45 -0.3 320,941 + AZOBR_RS23575 0.45 -2.4 320,941 + AZOBR_RS23575 0.45 +0.7 320,941 + AZOBR_RS23575 0.45 +0.4 320,942 - AZOBR_RS23575 0.45 -2.0 321,365 - AZOBR_RS23575 0.85 -0.0 321,365 - AZOBR_RS23575 0.85 -1.1 321,649 + -1.0 322,192 - AZOBR_RS23580 0.40 -0.5 322,211 + AZOBR_RS23580 0.41 -2.5 322,212 - AZOBR_RS23580 0.41 -0.1 323,418 - AZOBR_RS23585 0.52 +0.2 323,510 + AZOBR_RS23585 0.63 +1.2 323,510 + AZOBR_RS23585 0.63 -1.1 323,511 - AZOBR_RS23585 0.63 -0.1 323,511 - AZOBR_RS23585 0.63 -1.1 323,511 - AZOBR_RS23585 0.63 +0.3 323,511 - AZOBR_RS23585 0.63 +0.2 323,511 - AZOBR_RS23585 0.63 -0.5 323,511 - AZOBR_RS23585 0.63 -0.2 323,821 - -1.2 323,855 - -0.5
Or see this region's nucleotide sequence