Experiment: Paraquat dichloride 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS23555 and AZOBR_RS23560 are separated by 107 nucleotides AZOBR_RS23560 and AZOBR_RS23565 overlap by 4 nucleotides
AZOBR_RS23555: AZOBR_RS23555 - beta-lactamase, at 315,105 to 315,995
_RS23555
AZOBR_RS23560: AZOBR_RS23560 - LysR family transcriptional regulator, at 316,103 to 316,978
_RS23560
AZOBR_RS23565: AZOBR_RS23565 - D-threo-aldose 1-dehydrogenase, at 316,975 to 317,925
_RS23565
Position (kb) 316
317
318 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 316.065 kb on + strand at 316.886 kb on + strand, within AZOBR_RS23560 at 316.976 kb on + strand at 316.977 kb on - strand at 317.273 kb on + strand, within AZOBR_RS23565 at 317.273 kb on + strand, within AZOBR_RS23565 at 317.273 kb on + strand, within AZOBR_RS23565 at 317.274 kb on - strand, within AZOBR_RS23565 at 317.274 kb on - strand, within AZOBR_RS23565 at 317.274 kb on - strand, within AZOBR_RS23565 at 317.358 kb on - strand, within AZOBR_RS23565 at 317.561 kb on + strand, within AZOBR_RS23565 at 317.636 kb on + strand, within AZOBR_RS23565 at 317.637 kb on - strand, within AZOBR_RS23565 at 317.637 kb on - strand, within AZOBR_RS23565 at 317.637 kb on - strand, within AZOBR_RS23565 at 317.642 kb on + strand, within AZOBR_RS23565 at 317.642 kb on + strand, within AZOBR_RS23565 at 318.357 kb on + strand at 318.358 kb on - strand at 318.359 kb on + strand at 318.450 kb on + strand at 318.855 kb on + strand at 318.855 kb on + strand at 318.855 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.02 mg/ml remove 316,065 + +1.2 316,886 + AZOBR_RS23560 0.89 -0.7 316,976 + -1.0 316,977 - +1.1 317,273 + AZOBR_RS23565 0.31 -0.2 317,273 + AZOBR_RS23565 0.31 -1.2 317,273 + AZOBR_RS23565 0.31 +0.2 317,274 - AZOBR_RS23565 0.31 -0.2 317,274 - AZOBR_RS23565 0.31 +1.2 317,274 - AZOBR_RS23565 0.31 +0.1 317,358 - AZOBR_RS23565 0.40 +0.9 317,561 + AZOBR_RS23565 0.62 +0.6 317,636 + AZOBR_RS23565 0.70 +1.2 317,637 - AZOBR_RS23565 0.70 -3.2 317,637 - AZOBR_RS23565 0.70 -1.8 317,637 - AZOBR_RS23565 0.70 -0.2 317,642 + AZOBR_RS23565 0.70 -0.7 317,642 + AZOBR_RS23565 0.70 +0.1 318,357 + +0.5 318,358 - -2.9 318,359 + -0.6 318,450 + -0.5 318,855 + +0.4 318,855 + +0.6 318,855 + -0.7
Or see this region's nucleotide sequence