Experiment: Paraquat dichloride 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS23535 and AZOBR_RS23540 are separated by 152 nucleotides AZOBR_RS23540 and AZOBR_RS23545 are separated by 14 nucleotides
AZOBR_RS23535: AZOBR_RS23535 - exodeoxyribonuclease V, at 308,580 to 309,776
_RS23535
AZOBR_RS23540: AZOBR_RS23540 - tetrathionate reductase subunit A, at 309,929 to 313,036
_RS23540
AZOBR_RS23545: AZOBR_RS23545 - tetrathionate reductase, at 313,051 to 314,184
_RS23545
Position (kb) 309
310
311
312
313
314 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 309.459 kb on - strand, within AZOBR_RS23535 at 309.522 kb on + strand, within AZOBR_RS23535 at 309.523 kb on - strand, within AZOBR_RS23535 at 309.682 kb on - strand at 309.682 kb on - strand at 310.333 kb on - strand, within AZOBR_RS23540 at 310.503 kb on + strand, within AZOBR_RS23540 at 310.744 kb on - strand, within AZOBR_RS23540 at 310.998 kb on + strand, within AZOBR_RS23540 at 311.188 kb on - strand, within AZOBR_RS23540 at 311.238 kb on + strand, within AZOBR_RS23540 at 311.324 kb on + strand, within AZOBR_RS23540 at 311.324 kb on + strand, within AZOBR_RS23540 at 311.352 kb on + strand, within AZOBR_RS23540 at 311.353 kb on - strand, within AZOBR_RS23540 at 311.463 kb on + strand, within AZOBR_RS23540 at 311.925 kb on + strand, within AZOBR_RS23540 at 311.925 kb on + strand, within AZOBR_RS23540 at 311.925 kb on + strand, within AZOBR_RS23540 at 311.925 kb on + strand, within AZOBR_RS23540 at 311.925 kb on + strand, within AZOBR_RS23540 at 311.926 kb on - strand, within AZOBR_RS23540 at 311.926 kb on - strand, within AZOBR_RS23540 at 311.926 kb on - strand, within AZOBR_RS23540 at 311.966 kb on + strand, within AZOBR_RS23540 at 311.966 kb on + strand, within AZOBR_RS23540 at 311.966 kb on + strand, within AZOBR_RS23540 at 311.967 kb on - strand, within AZOBR_RS23540 at 312.075 kb on + strand, within AZOBR_RS23540 at 312.075 kb on + strand, within AZOBR_RS23540 at 312.075 kb on + strand, within AZOBR_RS23540 at 312.267 kb on + strand, within AZOBR_RS23540 at 312.268 kb on - strand, within AZOBR_RS23540 at 312.268 kb on - strand, within AZOBR_RS23540 at 312.723 kb on + strand, within AZOBR_RS23540 at 312.723 kb on + strand, within AZOBR_RS23540 at 312.724 kb on - strand, within AZOBR_RS23540 at 312.938 kb on + strand at 312.939 kb on - strand at 312.939 kb on - strand at 312.939 kb on - strand at 313.220 kb on + strand, within AZOBR_RS23545 at 313.226 kb on + strand, within AZOBR_RS23545 at 313.633 kb on + strand, within AZOBR_RS23545 at 313.634 kb on - strand, within AZOBR_RS23545 at 313.853 kb on + strand, within AZOBR_RS23545 at 313.874 kb on + strand, within AZOBR_RS23545 at 313.875 kb on - strand, within AZOBR_RS23545 at 313.931 kb on + strand, within AZOBR_RS23545 at 313.932 kb on - strand, within AZOBR_RS23545 at 313.932 kb on - strand, within AZOBR_RS23545 at 313.932 kb on - strand, within AZOBR_RS23545 at 313.932 kb on - strand, within AZOBR_RS23545 at 313.932 kb on - strand, within AZOBR_RS23545 at 313.932 kb on - strand, within AZOBR_RS23545
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.02 mg/ml remove 309,459 - AZOBR_RS23535 0.73 -0.5 309,522 + AZOBR_RS23535 0.79 +0.5 309,523 - AZOBR_RS23535 0.79 -1.7 309,682 - -1.3 309,682 - +0.5 310,333 - AZOBR_RS23540 0.13 +0.2 310,503 + AZOBR_RS23540 0.18 +0.6 310,744 - AZOBR_RS23540 0.26 -2.7 310,998 + AZOBR_RS23540 0.34 -0.3 311,188 - AZOBR_RS23540 0.41 +0.3 311,238 + AZOBR_RS23540 0.42 -0.2 311,324 + AZOBR_RS23540 0.45 +0.3 311,324 + AZOBR_RS23540 0.45 -0.6 311,352 + AZOBR_RS23540 0.46 -1.5 311,353 - AZOBR_RS23540 0.46 +0.0 311,463 + AZOBR_RS23540 0.49 -1.4 311,925 + AZOBR_RS23540 0.64 -1.1 311,925 + AZOBR_RS23540 0.64 -1.3 311,925 + AZOBR_RS23540 0.64 +1.1 311,925 + AZOBR_RS23540 0.64 -0.4 311,925 + AZOBR_RS23540 0.64 +1.3 311,926 - AZOBR_RS23540 0.64 -0.4 311,926 - AZOBR_RS23540 0.64 +0.1 311,926 - AZOBR_RS23540 0.64 -0.7 311,966 + AZOBR_RS23540 0.66 +1.1 311,966 + AZOBR_RS23540 0.66 -0.1 311,966 + AZOBR_RS23540 0.66 -0.7 311,967 - AZOBR_RS23540 0.66 +1.1 312,075 + AZOBR_RS23540 0.69 -0.6 312,075 + AZOBR_RS23540 0.69 -0.4 312,075 + AZOBR_RS23540 0.69 -0.7 312,267 + AZOBR_RS23540 0.75 +0.0 312,268 - AZOBR_RS23540 0.75 -0.6 312,268 - AZOBR_RS23540 0.75 -0.4 312,723 + AZOBR_RS23540 0.90 +1.9 312,723 + AZOBR_RS23540 0.90 -2.8 312,724 - AZOBR_RS23540 0.90 -0.1 312,938 + -0.7 312,939 - +0.2 312,939 - +0.9 312,939 - +0.2 313,220 + AZOBR_RS23545 0.15 +0.2 313,226 + AZOBR_RS23545 0.15 +0.2 313,633 + AZOBR_RS23545 0.51 +0.1 313,634 - AZOBR_RS23545 0.51 -1.8 313,853 + AZOBR_RS23545 0.71 +0.2 313,874 + AZOBR_RS23545 0.73 +0.1 313,875 - AZOBR_RS23545 0.73 -0.6 313,931 + AZOBR_RS23545 0.78 -1.3 313,932 - AZOBR_RS23545 0.78 +0.4 313,932 - AZOBR_RS23545 0.78 +0.4 313,932 - AZOBR_RS23545 0.78 +0.3 313,932 - AZOBR_RS23545 0.78 -2.5 313,932 - AZOBR_RS23545 0.78 -0.3 313,932 - AZOBR_RS23545 0.78 +0.4
Or see this region's nucleotide sequence