Experiment: Paraquat dichloride 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS23530 and AZOBR_RS23535 are separated by 65 nucleotides AZOBR_RS23535 and AZOBR_RS23540 are separated by 152 nucleotides
AZOBR_RS23530: AZOBR_RS23530 - putative Major facilitator family transporter, at 307,321 to 308,514
_RS23530
AZOBR_RS23535: AZOBR_RS23535 - exodeoxyribonuclease V, at 308,580 to 309,776
_RS23535
AZOBR_RS23540: AZOBR_RS23540 - tetrathionate reductase subunit A, at 309,929 to 313,036
_RS23540
Position (kb) 308
309
310 Strain fitness (log2 ratio) -2
-1
0
1
2 at 307.663 kb on + strand, within AZOBR_RS23530 at 307.663 kb on + strand, within AZOBR_RS23530 at 307.663 kb on + strand, within AZOBR_RS23530 at 307.664 kb on - strand, within AZOBR_RS23530 at 307.664 kb on - strand, within AZOBR_RS23530 at 307.664 kb on - strand, within AZOBR_RS23530 at 307.664 kb on - strand, within AZOBR_RS23530 at 307.744 kb on + strand, within AZOBR_RS23530 at 307.744 kb on + strand, within AZOBR_RS23530 at 307.744 kb on + strand, within AZOBR_RS23530 at 307.844 kb on - strand, within AZOBR_RS23530 at 307.927 kb on + strand, within AZOBR_RS23530 at 307.927 kb on + strand, within AZOBR_RS23530 at 307.927 kb on + strand, within AZOBR_RS23530 at 307.927 kb on + strand, within AZOBR_RS23530 at 307.927 kb on + strand, within AZOBR_RS23530 at 307.927 kb on + strand, within AZOBR_RS23530 at 307.928 kb on - strand, within AZOBR_RS23530 at 308.272 kb on + strand, within AZOBR_RS23530 at 308.273 kb on - strand, within AZOBR_RS23530 at 308.384 kb on + strand, within AZOBR_RS23530 at 308.431 kb on + strand at 308.542 kb on + strand at 308.543 kb on - strand at 308.851 kb on - strand, within AZOBR_RS23535 at 309.459 kb on - strand, within AZOBR_RS23535 at 309.522 kb on + strand, within AZOBR_RS23535 at 309.523 kb on - strand, within AZOBR_RS23535 at 309.682 kb on - strand at 309.682 kb on - strand at 310.333 kb on - strand, within AZOBR_RS23540 at 310.503 kb on + strand, within AZOBR_RS23540 at 310.744 kb on - strand, within AZOBR_RS23540
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.02 mg/ml remove 307,663 + AZOBR_RS23530 0.29 -1.2 307,663 + AZOBR_RS23530 0.29 -0.1 307,663 + AZOBR_RS23530 0.29 -0.1 307,664 - AZOBR_RS23530 0.29 +0.3 307,664 - AZOBR_RS23530 0.29 +0.2 307,664 - AZOBR_RS23530 0.29 +0.9 307,664 - AZOBR_RS23530 0.29 +0.1 307,744 + AZOBR_RS23530 0.35 -1.4 307,744 + AZOBR_RS23530 0.35 -1.1 307,744 + AZOBR_RS23530 0.35 +0.5 307,844 - AZOBR_RS23530 0.44 -1.4 307,927 + AZOBR_RS23530 0.51 +0.2 307,927 + AZOBR_RS23530 0.51 +0.7 307,927 + AZOBR_RS23530 0.51 +0.5 307,927 + AZOBR_RS23530 0.51 +0.5 307,927 + AZOBR_RS23530 0.51 -0.1 307,927 + AZOBR_RS23530 0.51 +0.1 307,928 - AZOBR_RS23530 0.51 -0.5 308,272 + AZOBR_RS23530 0.80 -1.0 308,273 - AZOBR_RS23530 0.80 +0.6 308,384 + AZOBR_RS23530 0.89 +1.8 308,431 + +0.5 308,542 + -0.3 308,543 - +0.6 308,851 - AZOBR_RS23535 0.23 -1.4 309,459 - AZOBR_RS23535 0.73 -0.5 309,522 + AZOBR_RS23535 0.79 +0.5 309,523 - AZOBR_RS23535 0.79 -1.7 309,682 - -1.3 309,682 - +0.5 310,333 - AZOBR_RS23540 0.13 +0.2 310,503 + AZOBR_RS23540 0.18 +0.6 310,744 - AZOBR_RS23540 0.26 -2.7
Or see this region's nucleotide sequence