Experiment: Paraquat dichloride 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS23065 and AZOBR_RS23070 are separated by 134 nucleotides
AZOBR_RS23065: AZOBR_RS23065 - LacI family transcription regulator, at 189,761 to 190,846
_RS23065
AZOBR_RS23070: AZOBR_RS23070 - ABC transporter substrate-binding protein, at 190,981 to 192,036
_RS23070
Position (kb) 190
191
192
193 Strain fitness (log2 ratio) -1
0
1 at 190.044 kb on + strand, within AZOBR_RS23065 at 190.044 kb on + strand, within AZOBR_RS23065 at 190.044 kb on + strand, within AZOBR_RS23065 at 190.044 kb on + strand, within AZOBR_RS23065 at 190.044 kb on + strand, within AZOBR_RS23065 at 190.045 kb on - strand, within AZOBR_RS23065 at 190.045 kb on - strand, within AZOBR_RS23065 at 190.045 kb on - strand, within AZOBR_RS23065 at 190.045 kb on - strand, within AZOBR_RS23065 at 190.314 kb on + strand, within AZOBR_RS23065 at 190.315 kb on - strand, within AZOBR_RS23065 at 190.662 kb on + strand, within AZOBR_RS23065 at 190.663 kb on - strand, within AZOBR_RS23065 at 190.663 kb on - strand, within AZOBR_RS23065 at 190.663 kb on - strand, within AZOBR_RS23065 at 190.663 kb on - strand, within AZOBR_RS23065 at 190.663 kb on - strand, within AZOBR_RS23065 at 191.128 kb on + strand, within AZOBR_RS23070 at 191.630 kb on - strand, within AZOBR_RS23070 at 191.630 kb on - strand, within AZOBR_RS23070 at 191.630 kb on - strand, within AZOBR_RS23070 at 191.702 kb on - strand, within AZOBR_RS23070 at 191.702 kb on - strand, within AZOBR_RS23070 at 191.962 kb on + strand at 191.962 kb on + strand at 192.260 kb on - strand at 192.260 kb on - strand at 192.481 kb on + strand at 192.481 kb on + strand at 192.481 kb on + strand at 192.482 kb on - strand at 192.988 kb on + strand at 192.988 kb on + strand at 192.988 kb on + strand at 192.988 kb on + strand at 192.989 kb on - strand at 193.009 kb on + strand at 193.009 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.02 mg/ml remove 190,044 + AZOBR_RS23065 0.26 -0.2 190,044 + AZOBR_RS23065 0.26 +1.1 190,044 + AZOBR_RS23065 0.26 +0.2 190,044 + AZOBR_RS23065 0.26 -0.2 190,044 + AZOBR_RS23065 0.26 +0.4 190,045 - AZOBR_RS23065 0.26 +1.4 190,045 - AZOBR_RS23065 0.26 +0.3 190,045 - AZOBR_RS23065 0.26 -1.1 190,045 - AZOBR_RS23065 0.26 +0.8 190,314 + AZOBR_RS23065 0.51 -1.6 190,315 - AZOBR_RS23065 0.51 +0.5 190,662 + AZOBR_RS23065 0.83 +0.4 190,663 - AZOBR_RS23065 0.83 +0.4 190,663 - AZOBR_RS23065 0.83 -0.9 190,663 - AZOBR_RS23065 0.83 +0.7 190,663 - AZOBR_RS23065 0.83 +1.0 190,663 - AZOBR_RS23065 0.83 -0.8 191,128 + AZOBR_RS23070 0.14 +0.0 191,630 - AZOBR_RS23070 0.61 -1.3 191,630 - AZOBR_RS23070 0.61 -0.2 191,630 - AZOBR_RS23070 0.61 +0.6 191,702 - AZOBR_RS23070 0.68 -1.6 191,702 - AZOBR_RS23070 0.68 +0.8 191,962 + -0.2 191,962 + +0.3 192,260 - +0.3 192,260 - -1.1 192,481 + -1.0 192,481 + -0.1 192,481 + +0.5 192,482 - -0.2 192,988 + -0.2 192,988 + -0.0 192,988 + +0.1 192,988 + -0.5 192,989 - +0.4 193,009 + +0.8 193,009 + +0.5
Or see this region's nucleotide sequence