Experiment: Paraquat dichloride 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS23050 and AZOBR_RS23055 are separated by 181 nucleotides AZOBR_RS23055 and AZOBR_RS23060 are separated by 167 nucleotides
AZOBR_RS23050: AZOBR_RS23050 - decarboxylase, at 186,016 to 187,563
_RS23050
AZOBR_RS23055: AZOBR_RS23055 - hypothetical protein, at 187,745 to 188,689
_RS23055
AZOBR_RS23060: AZOBR_RS23060 - hypothetical protein, at 188,857 to 189,729
_RS23060
Position (kb) 187
188
189 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 187.121 kb on - strand, within AZOBR_RS23050 at 187.121 kb on - strand, within AZOBR_RS23050 at 187.267 kb on + strand, within AZOBR_RS23050 at 187.267 kb on + strand, within AZOBR_RS23050 at 187.267 kb on + strand, within AZOBR_RS23050 at 187.267 kb on + strand, within AZOBR_RS23050 at 187.268 kb on - strand, within AZOBR_RS23050 at 187.650 kb on + strand at 187.650 kb on + strand at 187.651 kb on - strand at 188.168 kb on + strand, within AZOBR_RS23055 at 188.168 kb on + strand, within AZOBR_RS23055 at 188.168 kb on + strand, within AZOBR_RS23055 at 188.169 kb on - strand, within AZOBR_RS23055 at 188.169 kb on - strand, within AZOBR_RS23055 at 188.169 kb on - strand, within AZOBR_RS23055 at 188.273 kb on + strand, within AZOBR_RS23055 at 188.274 kb on - strand, within AZOBR_RS23055 at 188.291 kb on + strand, within AZOBR_RS23055 at 188.292 kb on - strand, within AZOBR_RS23055 at 188.438 kb on + strand, within AZOBR_RS23055 at 188.438 kb on + strand, within AZOBR_RS23055 at 188.438 kb on + strand, within AZOBR_RS23055 at 188.438 kb on + strand, within AZOBR_RS23055 at 188.439 kb on - strand, within AZOBR_RS23055 at 188.439 kb on - strand, within AZOBR_RS23055 at 188.439 kb on - strand, within AZOBR_RS23055 at 188.439 kb on - strand, within AZOBR_RS23055 at 188.861 kb on + strand at 188.861 kb on + strand at 188.862 kb on - strand at 188.862 kb on - strand at 188.862 kb on - strand at 188.862 kb on - strand at 189.166 kb on + strand, within AZOBR_RS23060 at 189.167 kb on - strand, within AZOBR_RS23060 at 189.676 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.02 mg/ml remove 187,121 - AZOBR_RS23050 0.71 +0.1 187,121 - AZOBR_RS23050 0.71 -2.4 187,267 + AZOBR_RS23050 0.81 -0.3 187,267 + AZOBR_RS23050 0.81 -0.1 187,267 + AZOBR_RS23050 0.81 -0.2 187,267 + AZOBR_RS23050 0.81 +0.6 187,268 - AZOBR_RS23050 0.81 -0.7 187,650 + -0.0 187,650 + +0.3 187,651 - -4.0 188,168 + AZOBR_RS23055 0.45 +0.8 188,168 + AZOBR_RS23055 0.45 -0.5 188,168 + AZOBR_RS23055 0.45 +0.8 188,169 - AZOBR_RS23055 0.45 -2.4 188,169 - AZOBR_RS23055 0.45 +0.0 188,169 - AZOBR_RS23055 0.45 -0.2 188,273 + AZOBR_RS23055 0.56 -0.1 188,274 - AZOBR_RS23055 0.56 +0.1 188,291 + AZOBR_RS23055 0.58 -0.4 188,292 - AZOBR_RS23055 0.58 +0.3 188,438 + AZOBR_RS23055 0.73 -1.2 188,438 + AZOBR_RS23055 0.73 -1.1 188,438 + AZOBR_RS23055 0.73 -0.0 188,438 + AZOBR_RS23055 0.73 -0.3 188,439 - AZOBR_RS23055 0.73 -0.6 188,439 - AZOBR_RS23055 0.73 -0.3 188,439 - AZOBR_RS23055 0.73 -2.0 188,439 - AZOBR_RS23055 0.73 -1.9 188,861 + -0.7 188,861 + -0.2 188,862 - -3.1 188,862 - +0.2 188,862 - -0.2 188,862 - +2.0 189,166 + AZOBR_RS23060 0.35 -0.1 189,167 - AZOBR_RS23060 0.36 +0.3 189,676 + +1.6
Or see this region's nucleotide sequence