Experiment: Paraquat dichloride 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS18145 and AZOBR_RS18150 overlap by 19 nucleotides AZOBR_RS18150 and AZOBR_RS18155 are separated by 61 nucleotides AZOBR_RS18155 and AZOBR_RS18160 are separated by 70 nucleotides
AZOBR_RS18145: AZOBR_RS18145 - racemase, at 828,608 to 829,855
_RS18145
AZOBR_RS18150: AZOBR_RS18150 - membrane protein, at 829,837 to 830,988
_RS18150
AZOBR_RS18155: AZOBR_RS18155 - enoyl-CoA hydratase, at 831,050 to 831,796
_RS18155
AZOBR_RS18160: AZOBR_RS18160 - fumarylacetoacetate hydrolase, at 831,867 to 833,012
_RS18160
Position (kb) 829
830
831 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 828.909 kb on - strand, within AZOBR_RS18145 at 828.909 kb on - strand, within AZOBR_RS18145 at 828.944 kb on + strand, within AZOBR_RS18145 at 828.945 kb on - strand, within AZOBR_RS18145 at 828.980 kb on + strand, within AZOBR_RS18145 at 829.016 kb on + strand, within AZOBR_RS18145 at 829.017 kb on - strand, within AZOBR_RS18145 at 829.115 kb on + strand, within AZOBR_RS18145 at 829.116 kb on - strand, within AZOBR_RS18145 at 829.139 kb on + strand, within AZOBR_RS18145 at 829.316 kb on + strand, within AZOBR_RS18145 at 829.317 kb on - strand, within AZOBR_RS18145 at 829.317 kb on - strand, within AZOBR_RS18145 at 829.560 kb on - strand, within AZOBR_RS18145 at 829.560 kb on - strand, within AZOBR_RS18145 at 829.560 kb on - strand, within AZOBR_RS18145 at 829.619 kb on + strand, within AZOBR_RS18145 at 829.620 kb on - strand, within AZOBR_RS18145 at 829.876 kb on + strand at 829.877 kb on - strand at 830.138 kb on - strand, within AZOBR_RS18150 at 830.522 kb on - strand, within AZOBR_RS18150 at 830.522 kb on - strand, within AZOBR_RS18150 at 830.530 kb on + strand, within AZOBR_RS18150 at 830.531 kb on - strand, within AZOBR_RS18150 at 830.797 kb on + strand, within AZOBR_RS18150 at 830.830 kb on + strand, within AZOBR_RS18150 at 830.830 kb on + strand, within AZOBR_RS18150 at 830.855 kb on - strand, within AZOBR_RS18150 at 830.855 kb on - strand, within AZOBR_RS18150 at 830.855 kb on - strand, within AZOBR_RS18150 at 830.951 kb on - strand at 831.278 kb on + strand, within AZOBR_RS18155 at 831.278 kb on + strand, within AZOBR_RS18155 at 831.278 kb on + strand, within AZOBR_RS18155 at 831.332 kb on + strand, within AZOBR_RS18155 at 831.695 kb on + strand, within AZOBR_RS18155 at 831.794 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.02 mg/ml remove 828,909 - AZOBR_RS18145 0.24 -0.1 828,909 - AZOBR_RS18145 0.24 +1.0 828,944 + AZOBR_RS18145 0.27 +0.0 828,945 - AZOBR_RS18145 0.27 -4.0 828,980 + AZOBR_RS18145 0.30 +0.0 829,016 + AZOBR_RS18145 0.33 -1.2 829,017 - AZOBR_RS18145 0.33 -0.1 829,115 + AZOBR_RS18145 0.41 +0.5 829,116 - AZOBR_RS18145 0.41 -1.6 829,139 + AZOBR_RS18145 0.43 +1.6 829,316 + AZOBR_RS18145 0.57 -0.2 829,317 - AZOBR_RS18145 0.57 +0.3 829,317 - AZOBR_RS18145 0.57 -0.2 829,560 - AZOBR_RS18145 0.76 +0.2 829,560 - AZOBR_RS18145 0.76 +1.3 829,560 - AZOBR_RS18145 0.76 +0.6 829,619 + AZOBR_RS18145 0.81 -0.8 829,620 - AZOBR_RS18145 0.81 +0.4 829,876 + -0.6 829,877 - -0.3 830,138 - AZOBR_RS18150 0.26 -0.5 830,522 - AZOBR_RS18150 0.59 +1.6 830,522 - AZOBR_RS18150 0.59 +0.5 830,530 + AZOBR_RS18150 0.60 +1.5 830,531 - AZOBR_RS18150 0.60 -0.2 830,797 + AZOBR_RS18150 0.83 -1.3 830,830 + AZOBR_RS18150 0.86 +0.2 830,830 + AZOBR_RS18150 0.86 +1.2 830,855 - AZOBR_RS18150 0.88 +0.9 830,855 - AZOBR_RS18150 0.88 +1.8 830,855 - AZOBR_RS18150 0.88 -0.3 830,951 - -3.1 831,278 + AZOBR_RS18155 0.31 +0.4 831,278 + AZOBR_RS18155 0.31 +0.2 831,278 + AZOBR_RS18155 0.31 -1.3 831,332 + AZOBR_RS18155 0.38 -0.7 831,695 + AZOBR_RS18155 0.86 -0.2 831,794 + +0.2
Or see this region's nucleotide sequence