Experiment: Paraquat dichloride 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS17365 and AZOBR_RS17370 are separated by 519 nucleotides AZOBR_RS17370 and AZOBR_RS17375 are separated by 13 nucleotides AZOBR_RS17375 and AZOBR_RS17380 are separated by 26 nucleotides
AZOBR_RS17365: AZOBR_RS17365 - uracil-DNA glycosylase, at 639,808 to 640,689
_RS17365
AZOBR_RS17370: AZOBR_RS17370 - murein transglycosylase, at 641,209 to 643,167
_RS17370
AZOBR_RS17375: AZOBR_RS17375 - molybdopterin biosynthesis protein B, at 643,181 to 643,717
_RS17375
AZOBR_RS17380: AZOBR_RS17380 - aminoglycoside phosphotransferase, at 643,744 to 644,709
_RS17380
Position (kb) 641
642
643
644 Strain fitness (log2 ratio) -2
-1
0
1
2 at 641.410 kb on + strand, within AZOBR_RS17370 at 641.546 kb on - strand, within AZOBR_RS17370 at 641.546 kb on - strand, within AZOBR_RS17370 at 641.953 kb on + strand, within AZOBR_RS17370 at 641.953 kb on + strand, within AZOBR_RS17370 at 641.953 kb on + strand, within AZOBR_RS17370 at 641.954 kb on - strand, within AZOBR_RS17370 at 641.990 kb on - strand, within AZOBR_RS17370 at 641.990 kb on - strand, within AZOBR_RS17370 at 642.110 kb on - strand, within AZOBR_RS17370 at 642.277 kb on + strand, within AZOBR_RS17370 at 642.829 kb on + strand, within AZOBR_RS17370 at 642.830 kb on - strand, within AZOBR_RS17370 at 642.830 kb on - strand, within AZOBR_RS17370 at 643.000 kb on + strand at 643.000 kb on + strand at 643.001 kb on - strand at 643.001 kb on - strand at 643.001 kb on - strand at 643.001 kb on - strand at 643.033 kb on + strand at 643.033 kb on + strand at 643.034 kb on - strand at 643.034 kb on - strand at 643.034 kb on - strand at 643.099 kb on + strand at 643.099 kb on + strand at 643.100 kb on - strand at 643.100 kb on - strand at 643.101 kb on + strand at 643.102 kb on - strand at 643.517 kb on + strand, within AZOBR_RS17375 at 643.518 kb on - strand, within AZOBR_RS17375 at 643.580 kb on + strand, within AZOBR_RS17375 at 643.580 kb on + strand, within AZOBR_RS17375 at 643.580 kb on + strand, within AZOBR_RS17375 at 643.580 kb on + strand, within AZOBR_RS17375 at 643.580 kb on + strand, within AZOBR_RS17375 at 643.580 kb on + strand, within AZOBR_RS17375 at 643.580 kb on + strand, within AZOBR_RS17375 at 643.581 kb on - strand, within AZOBR_RS17375 at 643.581 kb on - strand, within AZOBR_RS17375 at 643.581 kb on - strand, within AZOBR_RS17375 at 643.581 kb on - strand, within AZOBR_RS17375
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.02 mg/ml remove 641,410 + AZOBR_RS17370 0.10 -0.2 641,546 - AZOBR_RS17370 0.17 +0.3 641,546 - AZOBR_RS17370 0.17 +0.5 641,953 + AZOBR_RS17370 0.38 -1.2 641,953 + AZOBR_RS17370 0.38 -2.1 641,953 + AZOBR_RS17370 0.38 -1.8 641,954 - AZOBR_RS17370 0.38 -1.9 641,990 - AZOBR_RS17370 0.40 -0.2 641,990 - AZOBR_RS17370 0.40 +0.5 642,110 - AZOBR_RS17370 0.46 +0.5 642,277 + AZOBR_RS17370 0.55 -1.8 642,829 + AZOBR_RS17370 0.83 -0.0 642,830 - AZOBR_RS17370 0.83 +0.1 642,830 - AZOBR_RS17370 0.83 +0.7 643,000 + -2.2 643,000 + -1.0 643,001 - +2.4 643,001 - -0.5 643,001 - +0.5 643,001 - -1.2 643,033 + -0.2 643,033 + -0.3 643,034 - -0.0 643,034 - -0.7 643,034 - -0.4 643,099 + -1.4 643,099 + -0.8 643,100 - -0.5 643,100 - -0.9 643,101 + -0.4 643,102 - -0.7 643,517 + AZOBR_RS17375 0.63 +1.2 643,518 - AZOBR_RS17375 0.63 -0.2 643,580 + AZOBR_RS17375 0.74 +0.6 643,580 + AZOBR_RS17375 0.74 +1.1 643,580 + AZOBR_RS17375 0.74 +0.1 643,580 + AZOBR_RS17375 0.74 -1.3 643,580 + AZOBR_RS17375 0.74 +0.8 643,580 + AZOBR_RS17375 0.74 +0.7 643,580 + AZOBR_RS17375 0.74 -1.0 643,581 - AZOBR_RS17375 0.74 -0.2 643,581 - AZOBR_RS17375 0.74 +0.5 643,581 - AZOBR_RS17375 0.74 -1.1 643,581 - AZOBR_RS17375 0.74 -0.4
Or see this region's nucleotide sequence