Strain Fitness in Azospirillum brasilense Sp245 around AZOBR_RS16210

Experiment: Paraquat dichloride 0.02 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAZOBR_RS16205 and AZOBR_RS16210 are separated by 163 nucleotidesAZOBR_RS16210 and AZOBR_RS16215 are separated by 112 nucleotides AZOBR_RS16205: AZOBR_RS16205 - hypothetical protein, at 385,020 to 385,910 _RS16205 AZOBR_RS16210: AZOBR_RS16210 - hypothetical protein, at 386,074 to 386,292 _RS16210 AZOBR_RS16215: AZOBR_RS16215 - aspartyl-tRNA synthetase, at 386,405 to 388,234 _RS16215 Position (kb) 386 387Strain fitness (log2 ratio) -1 0 1at 385.377 kb on + strand, within AZOBR_RS16205at 385.378 kb on - strand, within AZOBR_RS16205at 385.964 kb on + strandat 386.254 kb on + strand, within AZOBR_RS16210at 386.254 kb on + strand, within AZOBR_RS16210at 386.255 kb on - strand, within AZOBR_RS16210at 386.255 kb on - strand, within AZOBR_RS16210at 386.255 kb on - strand, within AZOBR_RS16210

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Per-strain Table

Position Strand Gene LocusTag Fraction Paraquat dichloride 0.02 mg/ml
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385,377 + AZOBR_RS16205 0.40 -0.6
385,378 - AZOBR_RS16205 0.40 -1.7
385,964 + +0.2
386,254 + AZOBR_RS16210 0.82 +0.4
386,254 + AZOBR_RS16210 0.82 -0.6
386,255 - AZOBR_RS16210 0.83 -0.7
386,255 - AZOBR_RS16210 0.83 -0.0
386,255 - AZOBR_RS16210 0.83 +0.7

Or see this region's nucleotide sequence