Experiment: Paraquat dichloride 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS14885 and AZOBR_RS14890 are separated by 31 nucleotides AZOBR_RS14890 and AZOBR_RS14895 are separated by 437 nucleotides AZOBR_RS14895 and AZOBR_RS14900 are separated by 239 nucleotides AZOBR_RS14900 and AZOBR_RS14905 are separated by 154 nucleotides
AZOBR_RS14885: AZOBR_RS14885 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase, at 112,441 to 112,947
_RS14885
AZOBR_RS14890: AZOBR_RS14890 - hypothetical protein, at 112,979 to 113,464
_RS14890
AZOBR_RS14895: AZOBR_RS14895 - hypothetical protein, at 113,902 to 114,261
_RS14895
AZOBR_RS14900: AZOBR_RS14900 - hypothetical protein, at 114,501 to 114,761
_RS14900
AZOBR_RS14905: AZOBR_RS14905 - universal stress protein UspA, at 114,916 to 115,785
_RS14905
Position (kb) 113
114
115 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 112.977 kb on + strand at 112.977 kb on + strand at 112.977 kb on + strand at 113.469 kb on - strand at 113.504 kb on + strand at 113.506 kb on + strand at 113.507 kb on - strand at 113.507 kb on - strand at 113.570 kb on + strand at 113.613 kb on + strand at 113.666 kb on + strand at 113.963 kb on + strand, within AZOBR_RS14895 at 113.963 kb on + strand, within AZOBR_RS14895 at 113.963 kb on + strand, within AZOBR_RS14895 at 113.963 kb on + strand, within AZOBR_RS14895 at 113.963 kb on + strand, within AZOBR_RS14895 at 113.963 kb on + strand, within AZOBR_RS14895 at 113.963 kb on + strand, within AZOBR_RS14895 at 113.963 kb on + strand, within AZOBR_RS14895 at 113.964 kb on - strand, within AZOBR_RS14895 at 113.964 kb on - strand, within AZOBR_RS14895 at 113.964 kb on - strand, within AZOBR_RS14895 at 113.964 kb on - strand, within AZOBR_RS14895 at 114.036 kb on - strand, within AZOBR_RS14895 at 114.188 kb on + strand, within AZOBR_RS14895 at 114.188 kb on + strand, within AZOBR_RS14895 at 114.188 kb on + strand, within AZOBR_RS14895 at 114.189 kb on - strand, within AZOBR_RS14895 at 114.189 kb on - strand, within AZOBR_RS14895 at 114.470 kb on + strand at 114.502 kb on + strand at 114.503 kb on - strand at 114.959 kb on + strand at 114.959 kb on + strand at 114.959 kb on + strand at 114.959 kb on + strand at 114.959 kb on + strand at 114.960 kb on - strand at 114.960 kb on - strand at 114.960 kb on - strand at 115.093 kb on + strand, within AZOBR_RS14905 at 115.094 kb on - strand, within AZOBR_RS14905 at 115.099 kb on + strand, within AZOBR_RS14905
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.02 mg/ml remove 112,977 + +0.8 112,977 + +0.9 112,977 + +1.7 113,469 - -3.3 113,504 + -1.1 113,506 + -1.1 113,507 - -0.1 113,507 - +0.3 113,570 + -1.0 113,613 + -2.4 113,666 + +0.4 113,963 + AZOBR_RS14895 0.17 -0.6 113,963 + AZOBR_RS14895 0.17 +0.2 113,963 + AZOBR_RS14895 0.17 -2.5 113,963 + AZOBR_RS14895 0.17 -0.1 113,963 + AZOBR_RS14895 0.17 +0.6 113,963 + AZOBR_RS14895 0.17 -0.2 113,963 + AZOBR_RS14895 0.17 +1.2 113,963 + AZOBR_RS14895 0.17 +2.1 113,964 - AZOBR_RS14895 0.17 -2.8 113,964 - AZOBR_RS14895 0.17 -0.2 113,964 - AZOBR_RS14895 0.17 -2.8 113,964 - AZOBR_RS14895 0.17 -0.6 114,036 - AZOBR_RS14895 0.37 +0.7 114,188 + AZOBR_RS14895 0.79 +0.4 114,188 + AZOBR_RS14895 0.79 +1.0 114,188 + AZOBR_RS14895 0.79 +1.3 114,189 - AZOBR_RS14895 0.80 -0.1 114,189 - AZOBR_RS14895 0.80 +1.2 114,470 + -2.9 114,502 + +0.2 114,503 - -2.2 114,959 + +1.5 114,959 + +0.3 114,959 + -0.5 114,959 + +0.9 114,959 + -1.1 114,960 - +0.2 114,960 - -0.8 114,960 - +0.8 115,093 + AZOBR_RS14905 0.20 +1.7 115,094 - AZOBR_RS14905 0.20 -2.1 115,099 + AZOBR_RS14905 0.21 -1.9
Or see this region's nucleotide sequence