Strain Fitness in Azospirillum brasilense Sp245 around AZOBR_RS12030
Experiment: Paraquat dichloride 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Paraquat dichloride 0.02 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,527,557 | - | +0.1 | |||
2,527,747 | + | AZOBR_RS12030 | 0.19 | +0.1 | |
2,528,020 | + | AZOBR_RS12030 | 0.54 | +0.0 | |
2,528,020 | + | AZOBR_RS12030 | 0.54 | -1.3 | |
2,528,020 | + | AZOBR_RS12030 | 0.54 | -1.4 | |
2,528,020 | + | AZOBR_RS12030 | 0.54 | +0.3 | |
2,528,020 | + | AZOBR_RS12030 | 0.54 | -0.2 | |
2,528,021 | - | AZOBR_RS12030 | 0.54 | -2.8 | |
2,528,093 | - | AZOBR_RS12030 | 0.63 | -0.2 | |
2,529,091 | + | AZOBR_RS12035 | 0.46 | +0.1 | |
2,529,091 | + | AZOBR_RS12035 | 0.46 | -1.5 | |
2,529,091 | + | AZOBR_RS12035 | 0.46 | +0.3 | |
2,529,100 | + | AZOBR_RS12035 | 0.47 | -0.3 | |
2,529,100 | + | AZOBR_RS12035 | 0.47 | -0.8 | |
2,529,100 | + | AZOBR_RS12035 | 0.47 | -0.0 | |
2,529,101 | - | AZOBR_RS12035 | 0.47 | +0.4 | |
2,529,208 | + | AZOBR_RS12035 | 0.54 | +1.3 | |
2,529,208 | + | AZOBR_RS12035 | 0.54 | +0.6 | |
2,529,208 | + | AZOBR_RS12035 | 0.54 | +0.5 | |
2,529,209 | - | AZOBR_RS12035 | 0.54 | -0.5 | |
2,529,209 | - | AZOBR_RS12035 | 0.54 | -3.7 | |
2,529,209 | - | AZOBR_RS12035 | 0.54 | +0.3 |
Or see this region's nucleotide sequence