Strain Fitness in Azospirillum brasilense Sp245 around AZOBR_RS09510
Experiment: Paraquat dichloride 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Paraquat dichloride 0.02 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,989,947 | + | AZOBR_RS09505 | 0.36 | +0.4 | |
1,989,947 | + | AZOBR_RS09505 | 0.36 | -1.4 | |
1,989,948 | - | AZOBR_RS09505 | 0.36 | -0.3 | |
1,989,948 | - | AZOBR_RS09505 | 0.36 | -0.2 | |
1,991,279 | - | -0.1 | |||
1,991,279 | - | +0.1 | |||
1,991,329 | - | -0.7 | |||
1,991,329 | - | -0.8 | |||
1,991,424 | + | -0.4 | |||
1,991,430 | + | -0.5 | |||
1,991,430 | + | -2.5 | |||
1,991,430 | + | -1.3 | |||
1,991,430 | + | +0.0 | |||
1,991,431 | - | +0.5 | |||
1,991,431 | - | -1.8 | |||
1,991,431 | - | -2.0 | |||
1,991,431 | - | -3.0 | |||
1,991,431 | - | -2.1 | |||
1,991,436 | + | -0.5 | |||
1,991,437 | - | -3.8 | |||
1,991,437 | - | -0.7 | |||
1,991,437 | - | -0.7 | |||
1,991,464 | - | -1.2 | |||
1,991,552 | + | -1.1 | |||
1,991,595 | + | AZOBR_RS09515 | 0.11 | -1.2 | |
1,991,595 | + | AZOBR_RS09515 | 0.11 | -0.9 | |
1,992,042 | + | AZOBR_RS09515 | 0.37 | -1.1 | |
1,992,078 | + | AZOBR_RS09515 | 0.40 | -0.7 | |
1,992,078 | + | AZOBR_RS09515 | 0.40 | +0.7 | |
1,992,150 | + | AZOBR_RS09515 | 0.44 | -3.2 | |
1,992,151 | - | AZOBR_RS09515 | 0.44 | -0.3 | |
1,992,151 | - | AZOBR_RS09515 | 0.44 | -1.9 |
Or see this region's nucleotide sequence