Strain Fitness in Azospirillum brasilense Sp245 around AZOBR_RS08490
Experiment: Paraquat dichloride 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Paraquat dichloride 0.02 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,780,794 | + | AZOBR_RS08480 | 0.69 | +1.1 | |
1,780,794 | + | AZOBR_RS08480 | 0.69 | +1.2 | |
1,780,795 | - | AZOBR_RS08480 | 0.69 | +1.7 | |
1,780,837 | - | AZOBR_RS08480 | 0.73 | +0.6 | |
1,780,837 | - | AZOBR_RS08480 | 0.73 | +0.6 | |
1,780,854 | - | AZOBR_RS08480 | 0.74 | -2.8 | |
1,780,884 | + | AZOBR_RS08480 | 0.77 | +0.1 | |
1,780,885 | - | AZOBR_RS08480 | 0.77 | +0.2 | |
1,780,885 | - | AZOBR_RS08480 | 0.77 | +0.5 | |
1,780,902 | + | AZOBR_RS08480 | 0.78 | -0.1 | |
1,780,902 | + | AZOBR_RS08480 | 0.78 | +1.2 | |
1,780,903 | - | AZOBR_RS08480 | 0.78 | -0.9 | |
1,781,038 | - | AZOBR_RS08480 | 0.89 | +0.5 | |
1,781,038 | - | AZOBR_RS08480 | 0.89 | +0.3 | |
1,781,038 | - | AZOBR_RS08480 | 0.89 | +0.8 | |
1,781,038 | - | AZOBR_RS08480 | 0.89 | -2.0 | |
1,781,038 | - | AZOBR_RS08480 | 0.89 | -0.5 | |
1,781,410 | + | AZOBR_RS08485 | 0.64 | -2.6 | |
1,782,042 | + | +0.6 | |||
1,782,117 | + | +0.2 | |||
1,782,117 | + | +1.7 | |||
1,782,117 | + | +2.3 | |||
1,782,253 | - | -0.4 | |||
1,782,330 | + | +0.3 | |||
1,782,330 | + | -0.8 | |||
1,782,331 | - | -2.3 | |||
1,782,627 | - | +0.3 | |||
1,782,627 | - | -0.1 | |||
1,782,627 | - | -0.1 | |||
1,782,729 | - | -0.2 | |||
1,782,768 | - | -1.9 |
Or see this region's nucleotide sequence