Strain Fitness in Azospirillum brasilense Sp245 around AZOBR_RS08450
Experiment: Paraquat dichloride 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Paraquat dichloride 0.02 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,774,104 | - | +0.0 | |||
1,774,288 | + | AZOBR_RS08450 | 0.19 | -1.3 | |
1,774,289 | - | AZOBR_RS08450 | 0.19 | +0.0 | |
1,774,394 | - | AZOBR_RS08450 | 0.32 | -1.5 | |
1,774,700 | - | AZOBR_RS08450 | 0.68 | +0.7 | |
1,774,708 | + | AZOBR_RS08450 | 0.69 | +1.1 | |
1,774,709 | - | AZOBR_RS08450 | 0.69 | -1.8 | |
1,774,709 | - | AZOBR_RS08450 | 0.69 | +0.8 | |
1,774,709 | - | AZOBR_RS08450 | 0.69 | -0.1 | |
1,774,709 | - | AZOBR_RS08450 | 0.69 | +1.2 | |
1,774,747 | + | AZOBR_RS08450 | 0.73 | +0.6 | |
1,774,747 | + | AZOBR_RS08450 | 0.73 | -0.8 | |
1,774,748 | - | AZOBR_RS08450 | 0.73 | +0.3 | |
1,775,079 | - | +0.6 | |||
1,775,079 | - | +0.5 | |||
1,775,079 | - | +0.6 | |||
1,775,264 | + | AZOBR_RS08455 | 0.29 | +0.9 | |
1,775,264 | + | AZOBR_RS08455 | 0.29 | +0.3 | |
1,775,264 | + | AZOBR_RS08455 | 0.29 | -0.1 | |
1,775,265 | - | AZOBR_RS08455 | 0.29 | +0.8 | |
1,775,265 | - | AZOBR_RS08455 | 0.29 | -3.2 | |
1,775,265 | - | AZOBR_RS08455 | 0.29 | -0.3 | |
1,775,265 | - | AZOBR_RS08455 | 0.29 | +0.2 | |
1,775,265 | - | AZOBR_RS08455 | 0.29 | -0.5 | |
1,775,603 | + | AZOBR_RS08455 | 0.66 | +0.3 | |
1,775,604 | - | AZOBR_RS08455 | 0.66 | -0.1 | |
1,775,869 | - | +0.5 |
Or see this region's nucleotide sequence