Experiment: Paraquat dichloride 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS08150 and AZOBR_RS08155 are separated by 120 nucleotides AZOBR_RS08155 and AZOBR_RS08160 overlap by 4 nucleotides AZOBR_RS08160 and AZOBR_RS08165 are separated by 351 nucleotides AZOBR_RS08165 and AZOBR_RS08170 are separated by 24 nucleotides
AZOBR_RS08150: AZOBR_RS08150 - transcriptional regulator, at 1,716,400 to 1,716,867
_RS08150
AZOBR_RS08155: AZOBR_RS08155 - hypothetical protein, at 1,716,988 to 1,717,818
_RS08155
AZOBR_RS08160: AZOBR_RS08160 - sugar transporter, at 1,717,815 to 1,720,814
_RS08160
AZOBR_RS08165: AZOBR_RS08165 - hypothetical protein, at 1,721,166 to 1,721,663
_RS08165
AZOBR_RS08170: AZOBR_RS08170 - carbon-nitrogen family hydrolase, at 1,721,688 to 1,722,584
_RS08170
Position (kb)
1717
1718
1719
1720
1721 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1716.844 kb on + strand at 1716.867 kb on + strand at 1716.870 kb on + strand at 1716.870 kb on + strand at 1716.871 kb on - strand at 1716.871 kb on - strand at 1716.871 kb on - strand at 1716.962 kb on + strand at 1716.963 kb on - strand at 1717.078 kb on + strand, within AZOBR_RS08155 at 1717.079 kb on - strand, within AZOBR_RS08155 at 1717.079 kb on - strand, within AZOBR_RS08155 at 1717.322 kb on + strand, within AZOBR_RS08155 at 1717.322 kb on + strand, within AZOBR_RS08155 at 1717.598 kb on + strand, within AZOBR_RS08155 at 1717.599 kb on - strand, within AZOBR_RS08155 at 1717.599 kb on - strand, within AZOBR_RS08155 at 1718.068 kb on + strand at 1718.500 kb on + strand, within AZOBR_RS08160 at 1718.500 kb on + strand, within AZOBR_RS08160 at 1718.501 kb on - strand, within AZOBR_RS08160 at 1718.501 kb on - strand, within AZOBR_RS08160 at 1718.749 kb on + strand, within AZOBR_RS08160 at 1718.750 kb on - strand, within AZOBR_RS08160 at 1718.812 kb on - strand, within AZOBR_RS08160 at 1718.812 kb on - strand, within AZOBR_RS08160 at 1719.241 kb on + strand, within AZOBR_RS08160 at 1719.242 kb on - strand, within AZOBR_RS08160 at 1719.311 kb on - strand, within AZOBR_RS08160 at 1719.311 kb on - strand, within AZOBR_RS08160 at 1719.605 kb on - strand, within AZOBR_RS08160 at 1720.175 kb on - strand, within AZOBR_RS08160 at 1720.175 kb on - strand, within AZOBR_RS08160 at 1720.175 kb on - strand, within AZOBR_RS08160 at 1720.175 kb on - strand, within AZOBR_RS08160 at 1720.175 kb on - strand, within AZOBR_RS08160 at 1720.385 kb on - strand, within AZOBR_RS08160 at 1720.583 kb on - strand at 1720.682 kb on - strand at 1720.825 kb on - strand at 1720.911 kb on - strand at 1720.974 kb on + strand at 1720.974 kb on + strand at 1720.975 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.02 mg/ml remove 1,716,844 + -0.0 1,716,867 + -0.2 1,716,870 + -2.3 1,716,870 + -0.4 1,716,871 - +0.8 1,716,871 - +0.8 1,716,871 - +0.1 1,716,962 + +0.3 1,716,963 - -2.2 1,717,078 + AZOBR_RS08155 0.11 +1.1 1,717,079 - AZOBR_RS08155 0.11 -3.3 1,717,079 - AZOBR_RS08155 0.11 +0.1 1,717,322 + AZOBR_RS08155 0.40 +0.1 1,717,322 + AZOBR_RS08155 0.40 -3.6 1,717,598 + AZOBR_RS08155 0.73 +0.6 1,717,599 - AZOBR_RS08155 0.74 +0.2 1,717,599 - AZOBR_RS08155 0.74 -0.0 1,718,068 + +0.1 1,718,500 + AZOBR_RS08160 0.23 +0.3 1,718,500 + AZOBR_RS08160 0.23 -0.3 1,718,501 - AZOBR_RS08160 0.23 -0.6 1,718,501 - AZOBR_RS08160 0.23 +0.1 1,718,749 + AZOBR_RS08160 0.31 -0.3 1,718,750 - AZOBR_RS08160 0.31 -0.3 1,718,812 - AZOBR_RS08160 0.33 +0.3 1,718,812 - AZOBR_RS08160 0.33 -0.3 1,719,241 + AZOBR_RS08160 0.48 -0.6 1,719,242 - AZOBR_RS08160 0.48 -0.2 1,719,311 - AZOBR_RS08160 0.50 +0.2 1,719,311 - AZOBR_RS08160 0.50 -1.4 1,719,605 - AZOBR_RS08160 0.60 +0.1 1,720,175 - AZOBR_RS08160 0.79 -0.3 1,720,175 - AZOBR_RS08160 0.79 +0.9 1,720,175 - AZOBR_RS08160 0.79 +1.5 1,720,175 - AZOBR_RS08160 0.79 +0.3 1,720,175 - AZOBR_RS08160 0.79 +0.9 1,720,385 - AZOBR_RS08160 0.86 -0.2 1,720,583 - +1.1 1,720,682 - +0.2 1,720,825 - +0.2 1,720,911 - -1.5 1,720,974 + +1.6 1,720,974 + -1.0 1,720,975 - -0.4
Or see this region's nucleotide sequence