Strain Fitness in Azospirillum brasilense Sp245 around AZOBR_RS08040
Experiment: Paraquat dichloride 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Paraquat dichloride 0.02 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,694,966 | - | AZOBR_RS08035 | 0.43 | -0.6 | |
1,694,966 | - | AZOBR_RS08035 | 0.43 | -0.3 | |
1,694,966 | - | AZOBR_RS08035 | 0.43 | +0.6 | |
1,695,037 | + | AZOBR_RS08035 | 0.54 | -1.4 | |
1,695,432 | + | -0.3 | |||
1,695,477 | + | +1.1 | |||
1,695,478 | - | +0.7 | |||
1,696,048 | + | AZOBR_RS08040 | 0.50 | -1.2 | |
1,696,048 | + | AZOBR_RS08040 | 0.50 | +0.3 | |
1,696,048 | + | AZOBR_RS08040 | 0.50 | -2.7 | |
1,696,049 | - | AZOBR_RS08040 | 0.51 | -0.0 | |
1,696,413 | + | -1.1 | |||
1,696,414 | - | +1.2 | |||
1,696,434 | + | -0.1 | |||
1,696,485 | + | -0.2 | |||
1,696,486 | - | +0.6 | |||
1,696,486 | - | -1.0 | |||
1,697,324 | + | AZOBR_RS08045 | 0.55 | -0.9 | |
1,697,324 | + | AZOBR_RS08045 | 0.55 | -2.1 | |
1,697,324 | + | AZOBR_RS08045 | 0.55 | -2.0 | |
1,697,325 | - | AZOBR_RS08045 | 0.55 | -1.2 | |
1,697,325 | - | AZOBR_RS08045 | 0.55 | -0.3 |
Or see this region's nucleotide sequence