Experiment: Paraquat dichloride 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS02205 and AZOBR_RS02210 are separated by 165 nucleotides AZOBR_RS02210 and AZOBR_RS02215 are separated by 79 nucleotides AZOBR_RS02215 and AZOBR_RS02220 are separated by 293 nucleotides
AZOBR_RS02205: AZOBR_RS02205 - ribonuclease PH, at 452,427 to 453,146
_RS02205
AZOBR_RS02210: AZOBR_RS02210 - HrcA family transcriptional regulator, at 453,312 to 454,352
_RS02210
AZOBR_RS02215: AZOBR_RS02215 - co-chaperone GrpE, at 454,432 to 455,055
_RS02215
AZOBR_RS02220: AZOBR_RS02220 - chemotaxis protein CheY, at 455,349 to 455,714
_RS02220
Position (kb) 453
454
455 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 452.428 kb on + strand at 452.428 kb on + strand at 452.428 kb on + strand at 452.429 kb on - strand at 452.429 kb on - strand at 452.647 kb on + strand, within AZOBR_RS02205 at 452.647 kb on + strand, within AZOBR_RS02205 at 452.647 kb on + strand, within AZOBR_RS02205 at 452.647 kb on + strand, within AZOBR_RS02205 at 452.647 kb on + strand, within AZOBR_RS02205 at 452.647 kb on + strand, within AZOBR_RS02205 at 453.186 kb on + strand at 453.186 kb on + strand at 453.187 kb on - strand at 453.187 kb on - strand at 453.255 kb on - strand at 453.369 kb on + strand at 453.369 kb on + strand at 453.369 kb on + strand at 453.370 kb on - strand at 453.370 kb on - strand at 453.370 kb on - strand at 453.486 kb on + strand, within AZOBR_RS02210 at 453.486 kb on + strand, within AZOBR_RS02210 at 453.487 kb on - strand, within AZOBR_RS02210 at 454.290 kb on + strand at 454.290 kb on + strand at 454.291 kb on - strand at 454.291 kb on - strand at 454.317 kb on + strand at 454.317 kb on + strand at 454.318 kb on - strand at 454.319 kb on + strand at 454.319 kb on + strand at 454.320 kb on - strand at 454.320 kb on - strand at 454.320 kb on - strand at 454.320 kb on - strand at 454.320 kb on - strand at 454.320 kb on - strand at 455.073 kb on - strand at 455.255 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.02 mg/ml remove 452,428 + +1.4 452,428 + +0.3 452,428 + -0.8 452,429 - +0.2 452,429 - +0.2 452,647 + AZOBR_RS02205 0.31 +1.4 452,647 + AZOBR_RS02205 0.31 -1.5 452,647 + AZOBR_RS02205 0.31 -0.8 452,647 + AZOBR_RS02205 0.31 +2.8 452,647 + AZOBR_RS02205 0.31 +1.5 452,647 + AZOBR_RS02205 0.31 +0.2 453,186 + +0.2 453,186 + +2.5 453,187 - +0.5 453,187 - -0.9 453,255 - -0.5 453,369 + -0.6 453,369 + -1.1 453,369 + +0.8 453,370 - -0.7 453,370 - -0.8 453,370 - -1.2 453,486 + AZOBR_RS02210 0.17 -1.1 453,486 + AZOBR_RS02210 0.17 -3.9 453,487 - AZOBR_RS02210 0.17 -0.3 454,290 + -0.5 454,290 + -0.2 454,291 - -0.3 454,291 - +1.7 454,317 + +0.8 454,317 + -0.3 454,318 - -0.1 454,319 + -0.4 454,319 + +1.3 454,320 - -2.6 454,320 - +0.2 454,320 - -4.1 454,320 - +1.8 454,320 - -0.3 454,320 - -1.1 455,073 - -0.6 455,255 + +0.1
Or see this region's nucleotide sequence