Experiment: Paraquat dichloride 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS01705 and AZOBR_RS01710 are separated by 13 nucleotides AZOBR_RS01710 and AZOBR_RS01715 are separated by 242 nucleotides AZOBR_RS01715 and AZOBR_RS01720 are separated by 217 nucleotides
AZOBR_RS01705: AZOBR_RS01705 - murein transglycosylase, at 347,605 to 348,810
_RS01705
AZOBR_RS01710: AZOBR_RS01710 - translocase, at 348,824 to 349,498
_RS01710
AZOBR_RS01715: AZOBR_RS01715 - exlusion protein FxsA, at 349,741 to 350,241
_RS01715
AZOBR_RS01720: AZOBR_RS01720 - preprotein translocase subunit SecB, at 350,459 to 350,956
_RS01720
Position (kb) 348
349
350 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 347.927 kb on + strand, within AZOBR_RS01705 at 347.928 kb on - strand, within AZOBR_RS01705 at 347.928 kb on - strand, within AZOBR_RS01705 at 347.928 kb on - strand, within AZOBR_RS01705 at 347.928 kb on - strand, within AZOBR_RS01705 at 347.928 kb on - strand at 347.928 kb on - strand, within AZOBR_RS01705 at 348.059 kb on + strand, within AZOBR_RS01705 at 348.059 kb on + strand, within AZOBR_RS01705 at 348.059 kb on + strand, within AZOBR_RS01705 at 348.059 kb on + strand, within AZOBR_RS01705 at 348.059 kb on + strand, within AZOBR_RS01705 at 348.060 kb on - strand, within AZOBR_RS01705 at 348.060 kb on - strand, within AZOBR_RS01705 at 348.060 kb on - strand, within AZOBR_RS01705 at 348.060 kb on - strand, within AZOBR_RS01705 at 348.339 kb on - strand, within AZOBR_RS01705 at 348.339 kb on - strand, within AZOBR_RS01705 at 348.339 kb on - strand, within AZOBR_RS01705 at 348.339 kb on - strand, within AZOBR_RS01705 at 348.444 kb on - strand, within AZOBR_RS01705 at 349.219 kb on - strand, within AZOBR_RS01710 at 349.559 kb on + strand at 349.559 kb on + strand at 349.585 kb on + strand at 349.585 kb on + strand at 349.585 kb on + strand at 349.586 kb on - strand at 349.586 kb on - strand at 349.586 kb on - strand at 349.586 kb on - strand at 349.704 kb on + strand at 349.705 kb on - strand at 349.705 kb on - strand at 349.705 kb on - strand at 349.708 kb on + strand at 350.082 kb on + strand, within AZOBR_RS01715 at 350.083 kb on - strand, within AZOBR_RS01715 at 350.083 kb on - strand, within AZOBR_RS01715 at 350.222 kb on - strand at 350.399 kb on + strand at 350.400 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.02 mg/ml remove 347,927 + AZOBR_RS01705 0.27 +0.7 347,928 - AZOBR_RS01705 0.27 +1.3 347,928 - AZOBR_RS01705 0.27 +0.6 347,928 - AZOBR_RS01705 0.27 -1.6 347,928 - AZOBR_RS01705 0.27 +0.3 347,928 - -0.3 347,928 - AZOBR_RS01705 0.27 -1.7 348,059 + AZOBR_RS01705 0.38 -0.4 348,059 + AZOBR_RS01705 0.38 -3.4 348,059 + AZOBR_RS01705 0.38 -0.3 348,059 + AZOBR_RS01705 0.38 -0.5 348,059 + AZOBR_RS01705 0.38 +0.1 348,060 - AZOBR_RS01705 0.38 +0.3 348,060 - AZOBR_RS01705 0.38 -3.3 348,060 - AZOBR_RS01705 0.38 -0.1 348,060 - AZOBR_RS01705 0.38 -1.3 348,339 - AZOBR_RS01705 0.61 +0.1 348,339 - AZOBR_RS01705 0.61 +1.3 348,339 - AZOBR_RS01705 0.61 -1.4 348,339 - AZOBR_RS01705 0.61 +0.7 348,444 - AZOBR_RS01705 0.70 +0.9 349,219 - AZOBR_RS01710 0.59 -2.1 349,559 + -0.6 349,559 + +0.4 349,585 + -1.4 349,585 + -0.8 349,585 + +0.6 349,586 - -0.2 349,586 - +0.1 349,586 - +0.0 349,586 - -0.6 349,704 + -1.1 349,705 - -0.3 349,705 - +0.7 349,705 - +0.2 349,708 + +1.2 350,082 + AZOBR_RS01715 0.68 -2.1 350,083 - AZOBR_RS01715 0.68 -1.1 350,083 - AZOBR_RS01715 0.68 -3.0 350,222 - -0.3 350,399 + +1.3 350,400 - +2.6
Or see this region's nucleotide sequence