Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_28015
Experiment: Sisomicin 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Sisomicin 0.001 mg/ml |
---|---|---|---|---|---|
remove | |||||
6,395,215 | + | AO356_28010 | 0.47 | -2.0 | |
6,395,567 | - | AO356_28010 | 0.76 | -1.1 | |
6,395,598 | - | AO356_28010 | 0.79 | +1.3 | |
6,395,618 | + | AO356_28010 | 0.81 | -0.3 | |
6,395,619 | - | AO356_28010 | 0.81 | +0.9 | |
6,395,619 | - | AO356_28010 | 0.81 | -0.3 | |
6,395,639 | - | AO356_28010 | 0.82 | -2.3 | |
6,395,858 | + | -0.2 | |||
6,396,066 | - | -0.6 | |||
6,396,122 | - | -1.0 | |||
6,396,122 | - | -0.2 | |||
6,396,833 | + | AO356_28015 | 0.51 | -0.4 | |
6,396,868 | - | AO356_28015 | 0.53 | -0.4 | |
6,397,205 | + | AO356_28015 | 0.78 | -0.5 | |
6,397,206 | - | AO356_28015 | 0.78 | +0.1 | |
6,397,206 | - | AO356_28015 | 0.78 | -1.0 | |
6,397,206 | - | AO356_28015 | 0.78 | +1.0 | |
6,397,267 | + | AO356_28015 | 0.82 | +0.1 | |
6,397,764 | + | AO356_28020 | 0.23 | -0.5 | |
6,397,764 | + | AO356_28020 | 0.23 | -0.2 | |
6,397,764 | + | AO356_28020 | 0.23 | -1.5 | |
6,397,764 | + | AO356_28020 | 0.23 | -0.0 | |
6,398,293 | + | AO356_28020 | 0.68 | -0.3 | |
6,398,448 | + | AO356_28020 | 0.81 | -1.2 | |
6,398,449 | - | AO356_28020 | 0.81 | +0.4 | |
6,398,449 | - | AO356_28020 | 0.81 | -0.1 |
Or see this region's nucleotide sequence