Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_25880

Experiment: Sisomicin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.001 mg/ml
5,851,709	-		AO356_25875	0.83	-0.1
5,851,745	+		AO356_25875	0.84	+0.5
5,851,745	+		AO356_25875	0.84	+2.3
5,851,745	+		AO356_25875	0.84	+0.8
5,851,745	+		AO356_25875	0.84	+2.3
5,851,745	+		AO356_25875	0.84	+1.3
5,851,746	-		AO356_25875	0.84	-0.1
5,851,746	-		AO356_25875	0.84	+1.6
5,851,746	-		AO356_25875	0.84	+1.7
5,851,775	+		AO356_25875	0.85	+0.2
5,851,775	+		AO356_25875	0.85	+0.2
5,851,986	-				-1.2
5,852,168	+				-0.5
5,852,168	+				+0.6
5,852,168	+				+0.3
5,852,169	-				-0.5
5,852,169	-				-0.3
5,852,175	-				-1.1
5,852,230	-				+0.0
5,852,676	-				+1.1
5,852,676	-				-0.6
5,852,676	-				+0.1
5,852,676	-				-0.0
5,852,796	+		AO356_25880	0.12	+0.4
5,852,874	+		AO356_25880	0.15	+0.5
5,853,050	-		AO356_25880	0.21	-0.8
5,853,219	+		AO356_25880	0.26	-1.1
5,853,446	-		AO356_25880	0.33	+0.5
5,853,543	+		AO356_25880	0.36	-1.0
5,853,543	+		AO356_25880	0.36	-1.0
5,853,543	+		AO356_25880	0.36	-1.0
5,853,543	+		AO356_25880	0.36	+0.8
5,853,543	+		AO356_25880	0.36	-2.3
5,853,544	-		AO356_25880	0.36	+0.4
5,853,544	-		AO356_25880	0.36	+1.3
5,853,544	-		AO356_25880	0.36	-0.8
5,853,684	+		AO356_25880	0.41	-0.7
5,853,740	-		AO356_25880	0.43	-1.3
5,853,746	-		AO356_25880	0.43	-0.3
5,853,746	-		AO356_25880	0.43	-1.5
5,854,044	+		AO356_25880	0.53	+0.4
5,854,044	+		AO356_25880	0.53	-1.2
5,854,045	-		AO356_25880	0.53	-1.8
5,854,404	+		AO356_25880	0.64	+0.8
5,854,404	+		AO356_25880	0.64	+0.3
5,854,410	+		AO356_25880	0.64	-2.6
5,854,411	-		AO356_25880	0.64	-1.5
5,854,411	-		AO356_25880	0.64	+0.4
5,854,411	-		AO356_25880	0.64	-0.1
5,854,615	-		AO356_25880	0.71	-0.1
5,854,641	+		AO356_25880	0.72	+0.5
5,854,641	+		AO356_25880	0.72	+0.1
5,854,641	+		AO356_25880	0.72	+0.7
5,854,641	+		AO356_25880	0.72	-0.6
5,854,642	-		AO356_25880	0.72	+0.3
5,854,642	-		AO356_25880	0.72	+0.4
5,854,659	+		AO356_25880	0.72	+0.8
5,854,660	-		AO356_25880	0.72	+1.0
5,854,660	-		AO356_25880	0.72	-2.1
5,854,689	+		AO356_25880	0.73	-0.9
5,854,689	+		AO356_25880	0.73	+0.2
5,854,690	-		AO356_25880	0.73	+2.3
5,854,690	-		AO356_25880	0.73	-0.2
5,855,013	+		AO356_25880	0.84	+1.0
5,855,014	-		AO356_25880	0.84	-0.4
5,855,035	-		AO356_25880	0.84	+0.1
5,855,035	-		AO356_25880	0.84	+0.3
5,855,043	+		AO356_25880	0.85	+1.8
5,855,043	+		AO356_25880	0.85	-0.9
5,855,044	-		AO356_25880	0.85	-1.0
5,855,044	-		AO356_25880	0.85	-2.1
5,855,044	-		AO356_25880	0.85	+1.4
5,855,044	-		AO356_25880	0.85	-1.0
5,855,109	+		AO356_25880	0.87	-0.9
5,855,109	+		AO356_25880	0.87	-0.8
5,855,109	+		AO356_25880	0.87	-1.3
5,855,109	+		AO356_25880	0.87	-0.9
5,855,109	+		AO356_25880	0.87	+0.1
5,855,109	+		AO356_25880	0.87	-0.7
5,855,110	-		AO356_25880	0.87	-1.0
5,855,110	-		AO356_25880	0.87	-0.2
5,855,110	-		AO356_25880	0.87	-0.8
5,855,110	-		AO356_25880	0.87	-1.1
5,855,415	+				+0.9
5,855,415	+				-0.4
5,855,416	-				-1.8
5,855,418	-				-1.2
5,855,433	+				-0.1
5,855,439	+				-0.0
5,855,440	-				+0.5
5,855,630	+				-0.8
5,855,664	-		AO356_25885	0.10	-1.3
5,855,664	-		AO356_25885	0.10	+0.5
5,855,664	-		AO356_25885	0.10	+0.4
5,855,736	-		AO356_25885	0.15	-1.3
5,855,960	+		AO356_25885	0.30	+0.4
5,855,960	+		AO356_25885	0.30	-0.4
5,855,961	-		AO356_25885	0.30	+0.1
5,856,107	+		AO356_25885	0.40	-0.4
5,856,107	+		AO356_25885	0.40	-1.4
5,856,107	+		AO356_25885	0.40	+1.0
5,856,108	-		AO356_25885	0.40	-0.1
5,856,167	+		AO356_25885	0.44	+0.1
5,856,497	+		AO356_25885	0.67	-1.6
5,856,497	+		AO356_25885	0.67	-0.5
5,856,498	-		AO356_25885	0.67	-0.0
5,856,498	-		AO356_25885	0.67	+0.9