Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_21820

Experiment: Sisomicin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.001 mg/ml
4,881,567	+		AO356_21815	0.32	+0.1
4,881,568	-		AO356_21815	0.32	+0.1
4,881,568	-		AO356_21815	0.32	+1.0
4,881,568	-		AO356_21815	0.32	+0.2
4,881,610	-		AO356_21815	0.35	-1.8
4,881,610	-		AO356_21815	0.35	-0.4
4,881,802	-		AO356_21815	0.49	+1.5
4,881,802	-		AO356_21815	0.49	-1.1
4,881,844	-		AO356_21815	0.52	-0.4
4,881,844	-		AO356_21815	0.52	+0.9
4,882,437	+				+1.4
4,882,437	+				-0.8
4,882,438	-				-0.8
4,882,438	-				-0.6
4,882,438	-				+0.2
4,882,438	-				+1.0
4,882,440	+				-0.5
4,882,441	-				-0.9
4,882,441	-				+0.3
4,882,441	-				+0.0
4,882,479	+				-0.1
4,882,541	+				+0.5
4,882,542	-				-0.9
4,882,788	-				+1.5
4,883,288	+		AO356_21820	0.25	+0.3
4,883,294	+		AO356_21820	0.25	-0.5
4,883,448	-		AO356_21820	0.30	-0.6
4,883,456	+		AO356_21820	0.30	+0.2
4,883,456	+		AO356_21820	0.30	-1.5
4,883,456	+		AO356_21820	0.30	+0.4
4,883,457	-		AO356_21820	0.30	-0.3
4,883,457	-		AO356_21820	0.30	+1.0
4,883,503	+		AO356_21820	0.32	+1.0
4,883,549	+		AO356_21820	0.33	+0.9
4,883,550	-		AO356_21820	0.33	+0.4
4,883,684	+		AO356_21820	0.38	+2.1
4,883,684	+		AO356_21820	0.38	+0.3
4,883,685	-		AO356_21820	0.38	-1.7
4,883,685	-		AO356_21820	0.38	+0.1
4,883,685	-		AO356_21820	0.38	+0.0
4,883,685	-		AO356_21820	0.38	+0.6
4,883,742	-		AO356_21820	0.39	+0.8
4,883,742	-		AO356_21820	0.39	+0.2
4,883,949	+		AO356_21820	0.46	+0.9
4,883,950	-		AO356_21820	0.46	-0.5
4,884,203	+		AO356_21820	0.54	+0.3
4,884,204	-		AO356_21820	0.54	-1.4
4,884,204	-		AO356_21820	0.54	+0.7
4,884,204	-		AO356_21820	0.54	+0.2
4,884,300	-		AO356_21820	0.58	-0.0
4,884,300	-		AO356_21820	0.58	+0.2
4,884,401	+		AO356_21820	0.61	-0.1
4,884,401	+		AO356_21820	0.61	-0.4
4,884,402	-		AO356_21820	0.61	+2.8
4,884,402	-		AO356_21820	0.61	-0.4
4,884,497	+		AO356_21820	0.64	+0.5
4,884,498	-		AO356_21820	0.64	-2.3
4,884,498	-		AO356_21820	0.64	+0.5
4,884,498	-		AO356_21820	0.64	+2.3
4,884,498	-		AO356_21820	0.64	-0.9
4,884,608	+		AO356_21820	0.68	-0.0
4,884,609	-		AO356_21820	0.68	+0.1
4,884,662	+		AO356_21820	0.69	-0.6
4,884,662	+		AO356_21820	0.69	+0.2
4,884,708	-		AO356_21820	0.71	+0.7
4,884,708	-		AO356_21820	0.71	-0.2
4,884,708	-		AO356_21820	0.71	+2.0
4,884,785	+		AO356_21820	0.73	-1.6
4,884,785	+		AO356_21820	0.73	-0.8
4,884,785	+		AO356_21820	0.73	-1.8
4,884,785	+		AO356_21820	0.73	-1.7
4,884,785	+		AO356_21820	0.73	-0.1
4,884,785	+		AO356_21820	0.73	-0.9
4,884,786	-		AO356_21820	0.73	+0.0
4,884,786	-		AO356_21820	0.73	-0.4
4,885,686	+				-0.7
4,885,687	-				-0.8
4,885,687	-				-0.4
4,886,081	+				-0.1
4,886,082	-				+1.2
4,886,082	-				-0.2
4,886,123	+				-1.6
4,886,282	+		AO356_21825	0.17	-0.2
4,886,282	+		AO356_21825	0.17	+0.4
4,886,282	+		AO356_21825	0.17	-0.8
4,886,283	-		AO356_21825	0.17	-1.0
4,886,285	+		AO356_21825	0.17	-0.0
4,886,285	+		AO356_21825	0.17	-1.9
4,886,519	+		AO356_21825	0.28	-0.3