Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_20690

Experiment: Sisomicin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.001 mg/ml
4,614,352	+		AO356_20680	0.59	+0.6
4,614,363	-		AO356_20680	0.62	+0.4
4,614,363	-		AO356_20680	0.62	+0.6
4,614,390	+		AO356_20680	0.70	+0.9
4,614,390	+		AO356_20680	0.70	-0.5
4,614,390	+		AO356_20680	0.70	-1.6
4,614,391	-		AO356_20680	0.71	+0.6
4,614,391	-		AO356_20680	0.71	+1.7
4,614,391	-		AO356_20680	0.71	+1.1
4,614,408	+		AO356_20680	0.76	+0.1
4,614,409	-		AO356_20680	0.76	-0.4
4,614,409	-		AO356_20680	0.76	+2.3
4,614,423	+		AO356_20680	0.80	-0.9
4,614,423	+		AO356_20680	0.80	-1.0
4,614,423	+		AO356_20680	0.80	-1.7
4,614,423	+		AO356_20680	0.80	+0.7
4,614,423	+		AO356_20680	0.80	-1.3
4,614,424	-		AO356_20680	0.80	+0.1
4,614,424	-		AO356_20680	0.80	+0.2
4,614,424	-		AO356_20680	0.80	+0.5
4,614,424	-		AO356_20680	0.80	-0.6
4,614,438	+		AO356_20680	0.85	-0.8
4,614,438	+		AO356_20680	0.85	-0.5
4,614,439	-		AO356_20680	0.85	+0.9
4,614,459	+				+1.4
4,614,459	+				-1.6
4,614,460	-				+1.5
4,614,478	+				+0.5
4,614,549	+		AO356_20685	0.10	+0.2
4,614,550	-		AO356_20685	0.10	-0.4
4,614,550	-		AO356_20685	0.10	+0.1
4,614,702	-		AO356_20685	0.34	-0.1
4,614,825	+		AO356_20685	0.53	+0.9
4,614,832	+		AO356_20685	0.54	+1.5
4,614,832	+		AO356_20685	0.54	+0.6
4,614,891	-		AO356_20685	0.64	+0.2
4,615,055	-		AO356_20685	0.89	+1.0
4,615,064	+				+0.2
4,615,064	+				+1.3
4,615,065	-				-0.2
4,615,065	-				+1.7
4,615,066	+				-0.9
4,615,066	+				-0.9
4,615,066	+				-0.4
4,615,066	+				-1.0
4,615,066	+				-1.3
4,615,066	+				-0.4
4,615,066	+				-0.1
4,615,067	-				+1.5
4,615,067	-				-1.5
4,615,067	-				+0.3
4,615,067	-				+0.3
4,615,067	-				-0.4
4,615,067	-				-0.9
4,615,067	-				-0.5
4,615,067	-				-1.5
4,615,067	-				-0.6
4,615,067	-				-1.5
4,615,067	-				+0.9
4,615,125	+				+1.5
4,615,125	+				+0.4
4,615,126	-				+2.0
4,615,128	+				-0.1
4,615,128	+				-0.3
4,615,129	-				+0.3
4,615,162	-				-0.0
4,615,247	+				-0.2
4,615,247	+				-0.2
4,615,247	+				-0.7
4,615,247	+				+0.4
4,615,248	-				+0.2
4,615,248	-				-0.5
4,615,248	-				-0.9
4,615,268	+				-0.3
4,615,339	-		AO356_20690	0.19	-1.0
4,615,614	+		AO356_20690	0.55	-1.0
4,615,614	+		AO356_20690	0.55	+1.3
4,615,614	+		AO356_20690	0.55	-0.9
4,615,614	+		AO356_20690	0.55	-0.5
4,615,615	-		AO356_20690	0.55	+0.3
4,615,615	-		AO356_20690	0.55	+0.1
4,615,615	-		AO356_20690	0.55	-1.1
4,615,615	-		AO356_20690	0.55	+0.5
4,615,615	-		AO356_20690	0.55	+0.6
4,615,615	-		AO356_20690	0.55	-0.1
4,615,645	+		AO356_20690	0.59	-0.2
4,615,645	+		AO356_20690	0.59	-1.0
4,615,646	-		AO356_20690	0.59	-0.3
4,615,646	-		AO356_20690	0.59	-1.6
4,615,654	+		AO356_20690	0.60	-0.8
4,615,655	-		AO356_20690	0.60	+1.0
4,615,655	-		AO356_20690	0.60	-0.7
4,615,667	+		AO356_20690	0.61	-0.2
4,615,668	-		AO356_20690	0.62	-0.3
4,615,679	-		AO356_20690	0.63	-0.5
4,615,679	-		AO356_20690	0.63	-1.9
4,615,710	+		AO356_20690	0.67	-2.0
4,615,710	+		AO356_20690	0.67	-1.4
4,615,711	-		AO356_20690	0.67	-1.2
4,615,760	+		AO356_20690	0.74	+1.4
4,615,760	+		AO356_20690	0.74	-0.7
4,615,876	+		AO356_20690	0.89	-0.2
4,615,876	+		AO356_20690	0.89	-0.2
4,615,912	+				+0.9
4,615,941	-				+1.2
4,615,941	-				+0.8
4,615,941	-				+1.0
4,616,184	+		AO356_20695	0.29	+0.2
4,616,184	+		AO356_20695	0.29	+2.1
4,616,184	+		AO356_20695	0.29	+0.7
4,616,184	+		AO356_20695	0.29	-0.9
4,616,184	+		AO356_20695	0.29	+0.1
4,616,185	-		AO356_20695	0.29	+0.8
4,616,185	-		AO356_20695	0.29	+2.1
4,616,185	-		AO356_20695	0.29	-1.3
4,616,185	-		AO356_20695	0.29	-2.4
4,616,185	-		AO356_20695	0.29	-0.1
4,616,185	-		AO356_20695	0.29	-0.5
4,616,290	-		AO356_20695	0.49	-0.3
4,616,349	+		AO356_20695	0.60	-0.0
4,616,350	-		AO356_20695	0.60	+0.1
4,616,350	-		AO356_20695	0.60	+0.0
4,616,382	+		AO356_20695	0.66	+0.8
4,616,382	+		AO356_20695	0.66	+1.4
4,616,383	-		AO356_20695	0.66	-0.2
4,616,383	-		AO356_20695	0.66	-0.6
4,616,383	-		AO356_20695	0.66	-1.0
4,616,565	+				-0.8
4,616,566	-				-0.6
4,616,566	-				+0.1
4,616,572	+				+0.1
4,616,573	-				-0.2
4,616,631	+				-0.6
4,616,632	-				+0.3
4,616,632	-				-1.1
4,616,649	+				+0.9
4,616,650	-				-0.8
4,616,688	-		AO356_20700	0.11	-1.0
4,616,788	+		AO356_20700	0.21	+1.2
4,616,789	-		AO356_20700	0.21	+0.5
4,616,951	+		AO356_20700	0.36	+1.3
4,616,951	+		AO356_20700	0.36	-0.8
4,616,952	-		AO356_20700	0.36	+0.1
4,616,952	-		AO356_20700	0.36	+0.4
4,616,952	-		AO356_20700	0.36	+0.5
4,616,963	+		AO356_20700	0.37	-0.1
4,616,963	+		AO356_20700	0.37	+1.1