Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_16980

Experiment: Sisomicin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.001 mg/ml
3,825,644	+				+1.9
3,825,660	+				+2.2
3,825,660	+				+2.0
3,825,661	-				+2.4
3,825,661	-				+2.6
3,825,739	-		AO356_16970	0.14	+1.5
3,825,756	-		AO356_16970	0.17	+3.5
3,825,756	-		AO356_16970	0.17	+3.6
3,825,801	-		AO356_16970	0.24	+2.4
3,825,863	+		AO356_16970	0.34	+2.6
3,825,863	+		AO356_16970	0.34	+3.4
3,825,863	+		AO356_16970	0.34	+3.8
3,825,864	-		AO356_16970	0.34	+2.7
3,825,908	+		AO356_16970	0.41	+3.2
3,825,909	-		AO356_16970	0.41	+1.8
3,825,909	-		AO356_16970	0.41	+2.4
3,825,909	-		AO356_16970	0.41	+3.5
3,826,026	+		AO356_16970	0.60	+2.6
3,826,026	+		AO356_16970	0.60	+2.6
3,826,026	+		AO356_16970	0.60	+2.6
3,826,026	+		AO356_16970	0.60	+2.0
3,826,027	-		AO356_16970	0.60	+2.4
3,826,027	-		AO356_16970	0.60	+2.7
3,826,027	-		AO356_16970	0.60	+2.1
3,826,027	-		AO356_16970	0.60	+2.7
3,826,145	+		AO356_16970	0.79	+2.1
3,826,145	+		AO356_16970	0.79	+2.8
3,826,145	+		AO356_16970	0.79	+2.4
3,826,145	+		AO356_16970	0.79	+2.9
3,826,145	+		AO356_16970	0.79	+2.7
3,826,145	+		AO356_16970	0.79	+1.9
3,826,145	+		AO356_16970	0.79	+2.6
3,826,145	+		AO356_16970	0.79	+0.7
3,826,146	-		AO356_16970	0.79	+1.5
3,826,146	-		AO356_16970	0.79	+2.9
3,826,146	-		AO356_16970	0.79	+2.6
3,826,146	-		AO356_16970	0.79	+3.1
3,826,146	-		AO356_16970	0.79	+1.9
3,826,146	-		AO356_16970	0.79	+3.8
3,826,146	-		AO356_16970	0.79	+2.9
3,826,146	-		AO356_16970	0.79	+2.8
3,826,256	+				+2.8
3,826,257	-				+2.2
3,826,257	-				+3.3
3,826,274	+				+2.7
3,826,275	-				+3.3
3,826,275	-				+2.6
3,826,275	-				+2.5
3,826,334	+		AO356_16975	0.17	+3.3
3,826,334	+		AO356_16975	0.17	+3.7
3,826,334	+		AO356_16975	0.17	+2.8
3,826,335	-		AO356_16975	0.17	+2.8
3,826,335	-		AO356_16975	0.17	+3.0
3,826,394	+		AO356_16975	0.35	+2.7
3,826,395	-		AO356_16975	0.35	+3.1
3,826,455	+		AO356_16975	0.53	+3.4
3,826,456	-		AO356_16975	0.53	+2.8
3,826,456	-		AO356_16975	0.53	+3.4
3,826,472	+		AO356_16975	0.58	+2.3
3,826,472	+		AO356_16975	0.58	+3.0
3,826,472	+		AO356_16975	0.58	+4.0
3,826,473	-		AO356_16975	0.58	+2.3
3,826,473	-		AO356_16975	0.58	+2.1
3,826,507	+		AO356_16975	0.68	+2.8
3,826,507	+		AO356_16975	0.68	+3.0
3,826,507	+		AO356_16975	0.68	+3.0
3,826,508	-		AO356_16975	0.69	+2.5
3,826,508	-		AO356_16975	0.69	+2.6
3,826,508	-		AO356_16975	0.69	+2.8
3,826,508	-		AO356_16975	0.69	+2.9
3,826,508	-		AO356_16975	0.69	+3.1
3,826,508	-		AO356_16975	0.69	+3.4
3,826,641	+				+1.6
3,826,794	+		AO356_16980	0.19	+2.9
3,826,794	+		AO356_16980	0.19	+2.2
3,826,795	-		AO356_16980	0.19	+2.9
3,826,795	-		AO356_16980	0.19	+2.4
3,826,928	-		AO356_16980	0.34	+2.4
3,826,928	-		AO356_16980	0.34	+1.8
3,826,928	-		AO356_16980	0.34	+2.4
3,826,928	-		AO356_16980	0.34	+2.6
3,826,981	+		AO356_16980	0.40	+2.4
3,826,981	+		AO356_16980	0.40	+3.6
3,826,981	+		AO356_16980	0.40	+2.1
3,826,981	+		AO356_16980	0.40	+2.5
3,826,994	-		AO356_16980	0.42	+3.6
3,826,994	-		AO356_16980	0.42	+3.7
3,826,994	-		AO356_16980	0.42	+2.9
3,827,002	+		AO356_16980	0.43	+2.0
3,827,002	+		AO356_16980	0.43	+2.9
3,827,002	+		AO356_16980	0.43	+4.5
3,827,003	-		AO356_16980	0.43	+1.2
3,827,003	-		AO356_16980	0.43	+2.5
3,827,156	-		AO356_16980	0.60	+2.8
3,827,185	+		AO356_16980	0.63	+2.9
3,827,257	+		AO356_16980	0.71	+3.1
3,827,257	+		AO356_16980	0.71	+4.4
3,827,257	+		AO356_16980	0.71	+3.9
3,827,257	+		AO356_16980	0.71	+3.2
3,827,257	+		AO356_16980	0.71	+2.7
3,827,258	-		AO356_16980	0.71	+2.5
3,827,258	-		AO356_16980	0.71	+2.4
3,827,258	-		AO356_16980	0.71	+3.5
3,827,320	+		AO356_16980	0.78	+2.0
3,827,320	+		AO356_16980	0.78	+2.3
3,827,320	+		AO356_16980	0.78	+3.6
3,827,320	+		AO356_16980	0.78	+2.9
3,827,321	-		AO356_16980	0.78	+3.5
3,827,321	-		AO356_16980	0.78	+2.4
3,827,350	+		AO356_16980	0.82	+2.6
3,827,350	+		AO356_16980	0.82	+2.7
3,827,350	+		AO356_16980	0.82	+3.5
3,827,350	+		AO356_16980	0.82	+1.9
3,827,350	+		AO356_16980	0.82	+2.8
3,827,351	-		AO356_16980	0.82	+2.9
3,827,351	-		AO356_16980	0.82	+4.7
3,827,351	-		AO356_16980	0.82	+1.7
3,827,351	-		AO356_16980	0.82	+3.1
3,827,351	-		AO356_16980	0.82	+2.5
3,827,351	-		AO356_16980	0.82	+2.5
3,827,351	-		AO356_16980	0.82	+1.5
3,827,351	-		AO356_16980	0.82	+3.7
3,827,359	+		AO356_16980	0.83	+3.9
3,827,359	+		AO356_16980	0.83	+3.1
3,827,360	-		AO356_16980	0.83	+2.5
3,827,360	-		AO356_16980	0.83	+2.7
3,827,360	-		AO356_16980	0.83	+4.5
3,827,360	-		AO356_16980	0.83	+1.8
3,827,360	-		AO356_16980	0.83	+3.2
3,827,360	-		AO356_16980	0.83	+4.2
3,827,500	+				+0.8
3,827,500	+				-2.4
3,827,501	-				+0.5
3,827,501	-				+1.4
3,827,501	-				+0.8
3,827,509	+				+1.6
3,827,509	+				-1.5
3,827,510	-				+1.2
3,827,510	-				+0.7
3,827,649	+				+4.1
3,827,649	+				-0.6
3,827,649	+				+1.9
3,827,649	+				+0.7
3,827,649	+				+0.1
3,827,697	+				+1.1
3,827,697	+				-0.2
3,827,698	-				-0.8
3,827,712	+				+1.4
3,827,713	-				-0.1
3,827,713	-				+0.2
3,827,743	-				-1.0
3,827,743	-				+0.7
3,827,752	-				+1.5
3,827,811	+				+0.1
3,827,812	-				+0.1
3,827,812	-				-0.1
3,827,836	+				+0.7
3,827,836	+				+1.5
3,827,836	+				+0.3
3,827,836	+				-0.5
3,827,836	+				+0.6
3,827,837	-				+0.5
3,827,837	-				-0.1
3,827,837	-				+0.2
3,827,837	-				+0.7
3,827,837	-				-0.1
3,827,837	-				-0.2
3,827,837	-				+1.6
3,827,837	-				+0.6
3,827,837	-				+0.7
3,827,842	-				+0.6
3,827,842	-				+1.6
3,827,842	-				-0.6
3,827,842	-				-1.4
3,827,842	-				+0.1
3,827,873	+				+0.8
3,827,873	+				+0.1
3,827,873	+				-0.3
3,827,873	+				+0.4
3,827,873	+				+0.3
3,827,873	+				-0.3
3,827,873	+				+0.2
3,827,874	-		AO356_16990	0.10	-0.8
3,827,874	-		AO356_16990	0.10	+0.5
3,827,874	-		AO356_16990	0.10	-1.9
3,827,874	-		AO356_16990	0.10	+2.0
3,828,000	+		AO356_16990	0.50	+1.4
3,828,000	+		AO356_16990	0.50	+0.3
3,828,000	+		AO356_16990	0.50	+0.4
3,828,000	+		AO356_16990	0.50	-0.4
3,828,000	+		AO356_16990	0.50	+1.3
3,828,000	+		AO356_16990	0.50	+2.1
3,828,000	+		AO356_16990	0.50	-2.4
3,828,000	+		AO356_16990	0.50	+0.2
3,828,001	-		AO356_16990	0.50	+1.1
3,828,001	-		AO356_16990	0.50	+0.9
3,828,001	-		AO356_16990	0.50	+1.7
3,828,001	-		AO356_16990	0.50	+0.2
3,828,001	-		AO356_16990	0.50	+0.2
3,828,001	-		AO356_16990	0.50	+1.0
3,828,001	-		AO356_16990	0.50	-0.5
3,828,001	-		AO356_16990	0.50	+0.3
3,828,001	-		AO356_16990	0.50	-1.4
3,828,001	-		AO356_16990	0.50	-1.1
3,828,001	-		AO356_16990	0.50	+0.2
3,828,001	-		AO356_16990	0.50	-0.8
3,828,001	-		AO356_16990	0.50	+1.0
3,828,001	-		AO356_16990	0.50	+0.3
3,828,001	-		AO356_16990	0.50	+0.2
3,828,001	-		AO356_16990	0.50	+1.0
3,828,051	+		AO356_16990	0.66	+0.0
3,828,052	-		AO356_16990	0.67	-0.2
3,828,165	+				-0.6
3,828,165	+				+1.4
3,828,165	+				+0.5
3,828,165	+				+3.2
3,828,165	+				-1.1
3,828,165	+				-0.3
3,828,166	-				+1.0
3,828,166	-				-0.5
3,828,166	-				-1.3
3,828,166	-				-1.9
3,828,166	-				+0.0
3,828,166	-				-0.9
3,828,166	-				+0.4
3,828,166	-				+0.5
3,828,166	-				+1.0
3,828,166	-				+1.7
3,828,351	+				-1.4
3,828,351	+				+0.7
3,828,351	+				+0.2
3,828,351	+				-0.3
3,828,351	+				-0.3
3,828,351	+				+0.5
3,828,351	+				+0.7
3,828,352	-				+0.9
3,828,352	-				+1.5
3,828,491	+		AO356_16995	0.20	+0.6