Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_16335

Experiment: Sisomicin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.001 mg/ml
3,691,579	+		AO356_16325	0.66	+0.5
3,691,580	-		AO356_16325	0.66	-0.4
3,691,586	+		AO356_16325	0.67	+0.6
3,691,587	-		AO356_16325	0.67	-0.6
3,691,691	+		AO356_16325	0.78	-0.1
3,691,691	+		AO356_16325	0.78	-0.4
3,691,691	+		AO356_16325	0.78	+0.8
3,691,692	-		AO356_16325	0.79	-1.9
3,691,692	-		AO356_16325	0.79	-0.8
3,691,692	-		AO356_16325	0.79	+0.5
3,691,692	-		AO356_16325	0.79	+0.5
3,691,692	-		AO356_16325	0.79	-0.2
3,691,726	-		AO356_16325	0.82	-0.6
3,691,726	-		AO356_16325	0.82	-0.8
3,691,747	+		AO356_16325	0.85	-1.4
3,691,796	+				+0.0
3,691,796	+				+0.5
3,691,797	-				+0.0
3,691,869	+				+0.2
3,691,870	-				+0.5
3,691,870	-				-0.2
3,691,882	+				-0.4
3,691,882	+				+1.0
3,691,888	+				+0.1
3,691,888	+				-0.6
3,691,889	-				-0.7
3,691,889	-				+0.9
3,691,891	-				-1.2
3,692,182	-		AO356_16330	0.43	-0.8
3,692,257	+		AO356_16330	0.54	+0.2
3,692,258	-		AO356_16330	0.54	+0.0
3,692,258	-		AO356_16330	0.54	+1.0
3,692,258	-		AO356_16330	0.54	+0.9
3,692,258	-		AO356_16330	0.54	+1.0
3,692,258	-		AO356_16330	0.54	-1.2
3,692,258	-		AO356_16330	0.54	+4.3
3,692,259	+		AO356_16330	0.54	-1.6
3,692,259	+		AO356_16330	0.54	-0.3
3,692,264	-		AO356_16330	0.55	+0.1
3,692,301	+		AO356_16330	0.60	-0.8
3,692,301	+		AO356_16330	0.60	+0.0
3,692,303	+		AO356_16330	0.60	-0.1
3,692,303	+		AO356_16330	0.60	+0.2
3,692,303	+		AO356_16330	0.60	-0.6
3,692,303	+		AO356_16330	0.60	+1.3
3,692,303	+		AO356_16330	0.60	+0.9
3,692,304	-		AO356_16330	0.60	+0.9
3,692,304	-		AO356_16330	0.60	-1.8
3,692,518	+				+1.1
3,692,519	-				-0.4
3,692,519	-				+0.5
3,692,656	+				+1.6
3,692,656	+				-0.5
3,692,656	+				+0.6
3,692,749	+		AO356_16335	0.13	+0.3
3,692,750	-		AO356_16335	0.13	+1.0
3,692,750	-		AO356_16335	0.13	-1.7
3,692,750	-		AO356_16335	0.13	-0.6
3,692,750	-		AO356_16335	0.13	-1.6
3,692,750	-		AO356_16335	0.13	-0.6
3,692,785	+		AO356_16335	0.15	+0.1
3,692,786	-		AO356_16335	0.15	-1.1
3,692,786	-		AO356_16335	0.15	-2.3
3,692,799	+		AO356_16335	0.16	-0.5
3,692,799	+		AO356_16335	0.16	-1.5
3,692,799	+		AO356_16335	0.16	+0.5
3,692,799	+		AO356_16335	0.16	-0.1
3,692,799	+		AO356_16335	0.16	-0.0
3,692,799	+		AO356_16335	0.16	-0.6
3,692,800	-		AO356_16335	0.16	+0.2
3,692,944	+		AO356_16335	0.27	-0.1
3,692,947	+		AO356_16335	0.27	+0.9
3,692,948	-		AO356_16335	0.27	+0.8
3,692,948	-		AO356_16335	0.27	-0.8
3,692,948	-		AO356_16335	0.27	-0.6
3,692,948	-		AO356_16335	0.27	-0.4
3,692,948	-		AO356_16335	0.27	-0.4
3,693,246	+		AO356_16335	0.49	+0.2
3,693,246	+		AO356_16335	0.49	-0.3
3,693,247	-		AO356_16335	0.49	+0.5
3,693,319	+		AO356_16335	0.54	+0.4
3,693,319	+		AO356_16335	0.54	-0.6
3,693,319	+		AO356_16335	0.54	-0.7
3,693,319	+		AO356_16335	0.54	+0.8
3,693,320	-		AO356_16335	0.54	-1.0
3,693,320	-		AO356_16335	0.54	+0.5
3,693,320	-		AO356_16335	0.54	-0.6
3,693,320	-		AO356_16335	0.54	-1.2
3,693,320	-		AO356_16335	0.54	-0.6
3,693,320	-		AO356_16335	0.54	+1.6
3,693,320	-		AO356_16335	0.54	+0.1
3,693,320	-		AO356_16335	0.54	-0.3
3,693,619	+		AO356_16335	0.76	-0.8
3,693,619	+		AO356_16335	0.76	-1.3
3,693,620	-		AO356_16335	0.76	+0.1
3,693,620	-		AO356_16335	0.76	-0.7
3,693,669	+		AO356_16335	0.80	-0.1
3,693,669	+		AO356_16335	0.80	+0.5
3,693,669	+		AO356_16335	0.80	+0.4
3,693,670	-		AO356_16335	0.80	-0.7
3,693,736	+		AO356_16335	0.85	-0.2
3,693,736	+		AO356_16335	0.85	-1.2
3,693,737	-		AO356_16335	0.85	-0.1
3,693,737	-		AO356_16335	0.85	-1.5
3,693,770	+		AO356_16335	0.87	+0.7
3,693,770	+		AO356_16335	0.87	+0.0
3,693,770	+		AO356_16335	0.87	-0.4
3,693,770	+		AO356_16335	0.87	+0.1
3,693,771	-		AO356_16335	0.87	-1.1
3,693,771	-		AO356_16335	0.87	+1.3
3,693,771	-		AO356_16335	0.87	-0.5
3,693,771	-		AO356_16335	0.87	+0.8
3,693,771	-		AO356_16335	0.87	+1.2
3,693,859	+				+0.3
3,693,859	+				-2.1
3,693,859	+				+0.3
3,693,860	-				-0.3
3,693,993	+				+0.4
3,693,993	+				+1.4
3,693,993	+				-0.3
3,693,994	-				-0.4
3,693,994	-				+1.5
3,693,994	-				+1.1
3,693,994	-				-0.4
3,693,994	-				-0.6
3,694,113	+		AO356_16340	0.28	+0.8
3,694,114	-		AO356_16340	0.28	+0.7
3,694,164	+		AO356_16340	0.36	+0.2
3,694,164	+		AO356_16340	0.36	+0.1
3,694,164	+		AO356_16340	0.36	+0.5
3,694,165	-		AO356_16340	0.36	+1.0
3,694,315	-		AO356_16340	0.61	-0.4
3,694,315	-		AO356_16340	0.61	-0.1
3,694,315	-		AO356_16340	0.61	-0.9
3,694,558	-				-1.3
3,694,558	-				+0.7
3,694,565	+				+0.4
3,694,565	+				+1.7
3,694,565	+				-0.3
3,694,566	-				+0.3
3,694,566	-				-0.8
3,694,566	-				-1.4
3,694,566	-				+0.2
3,694,566	-				-0.0
3,694,568	+				+0.4
3,694,598	+				+0.1
3,694,599	-				+0.3
3,694,599	-				-1.0