Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_14010

Experiment: Sisomicin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.001 mg/ml
3,180,588	+		AO356_14000	0.76	+0.2
3,180,588	+		AO356_14000	0.76	+0.5
3,180,588	+		AO356_14000	0.76	+0.3
3,180,588	+		AO356_14000	0.76	-1.3
3,180,589	-		AO356_14000	0.76	+2.4
3,180,589	-		AO356_14000	0.76	-0.8
3,180,589	-		AO356_14000	0.76	-2.2
3,180,589	-		AO356_14000	0.76	-0.9
3,180,589	-		AO356_14000	0.76	+0.9
3,180,711	+		AO356_14000	0.86	-2.0
3,180,711	+		AO356_14000	0.86	-0.1
3,180,712	-		AO356_14000	0.86	+0.5
3,180,712	-		AO356_14000	0.86	-0.6
3,180,887	+				-0.3
3,180,951	+				+3.6
3,180,985	+		AO356_14005	0.16	-2.1
3,180,985	+		AO356_14005	0.16	+0.4
3,180,985	+		AO356_14005	0.16	-0.6
3,180,986	-		AO356_14005	0.17	+0.7
3,180,986	-		AO356_14005	0.17	-0.5
3,180,986	-		AO356_14005	0.17	+0.4
3,180,986	-		AO356_14005	0.17	+0.2
3,180,986	-		AO356_14005	0.17	+0.2
3,180,986	-		AO356_14005	0.17	-0.7
3,181,036	+		AO356_14005	0.40	-0.3
3,181,036	+		AO356_14005	0.40	+1.3
3,181,036	+		AO356_14005	0.40	-0.3
3,181,037	-		AO356_14005	0.41	+0.5
3,181,037	-		AO356_14005	0.41	+1.1
3,181,038	+		AO356_14005	0.41	-1.4
3,181,038	+		AO356_14005	0.41	-0.3
3,181,039	-		AO356_14005	0.42	-0.2
3,181,062	+		AO356_14005	0.53	-1.0
3,181,099	+		AO356_14005	0.70	+1.7
3,181,100	-		AO356_14005	0.70	+0.5
3,181,111	-		AO356_14005	0.76	-0.5
3,181,111	-		AO356_14005	0.76	-0.7
3,181,135	+		AO356_14005	0.87	-1.2
3,181,189	+				-0.4
3,181,261	+				+1.0
3,181,299	+				+1.1
3,181,300	-				-0.7
3,181,316	+				-1.1
3,181,381	+				+1.4
3,181,381	+				-0.7
3,181,399	+				+0.1
3,181,476	-				-0.4
3,181,550	+		AO356_14010	0.13	-0.7
3,181,550	+		AO356_14010	0.13	-2.1
3,181,550	+		AO356_14010	0.13	+2.5
3,181,619	+		AO356_14010	0.25	+1.5
3,181,619	+		AO356_14010	0.25	+0.5
3,181,619	+		AO356_14010	0.25	-1.1
3,181,619	+		AO356_14010	0.25	+0.6
3,181,619	+		AO356_14010	0.25	+0.3
3,181,620	-		AO356_14010	0.25	-1.7
3,181,620	-		AO356_14010	0.25	+0.2
3,181,620	-		AO356_14010	0.25	-0.5
3,181,620	-		AO356_14010	0.25	+0.2
3,181,664	+		AO356_14010	0.33	+0.8
3,181,664	+		AO356_14010	0.33	+0.4
3,181,665	-		AO356_14010	0.33	+2.1
3,181,665	-		AO356_14010	0.33	+0.2
3,181,721	+		AO356_14010	0.43	+0.3
3,181,721	+		AO356_14010	0.43	+1.5
3,181,722	-		AO356_14010	0.43	+0.1
3,181,722	-		AO356_14010	0.43	+0.4
3,181,722	-		AO356_14010	0.43	-1.4
3,181,722	-		AO356_14010	0.43	+1.0
3,181,722	-		AO356_14010	0.43	-0.3
3,182,080	+				-0.6
3,182,080	+				-2.0
3,182,081	-				-0.4
3,182,161	-				+0.5
3,182,161	-				+0.2
3,182,161	-				+1.1
3,182,161	-				-0.9
3,182,161	-				-0.5
3,182,176	-				+0.7
3,182,295	+		AO356_14015	0.33	+0.1
3,182,296	-		AO356_14015	0.33	+0.3
3,182,296	-		AO356_14015	0.33	+0.7
3,182,358	+		AO356_14015	0.48	+0.2
3,182,358	+		AO356_14015	0.48	-0.1
3,182,358	+		AO356_14015	0.48	+0.0
3,182,359	-		AO356_14015	0.48	-0.5
3,182,359	-		AO356_14015	0.48	+1.0
3,182,359	-		AO356_14015	0.48	-0.7
3,182,359	-		AO356_14015	0.48	-0.0
3,182,452	-		AO356_14015	0.70	+0.3
3,182,452	-		AO356_14015	0.70	-0.8
3,182,452	-		AO356_14015	0.70	-0.1
3,182,452	-		AO356_14015	0.70	+1.3
3,182,452	-		AO356_14015	0.70	+1.0
3,182,452	-		AO356_14015	0.70	+0.9
3,182,452	-		AO356_14015	0.70	-0.3
3,182,507	+		AO356_14015	0.83	+0.3
3,182,508	-		AO356_14015	0.83	-0.5
3,182,567	+				-0.7
3,182,568	-				+0.6
3,182,633	+				+0.2
3,182,652	+				-2.3
3,182,724	+				-1.1
3,182,740	+				-0.4
3,182,741	-				+0.3
3,182,788	+				+0.3
3,182,788	+				-0.1
3,182,788	+				+0.2
3,182,788	+				+0.5
3,182,788	+				-0.4
3,182,788	+				-0.5
3,182,789	-				-0.4
3,182,789	-				+0.1
3,182,789	-				-0.2
3,182,789	-				-0.4
3,182,789	-				-0.9
3,182,789	-				-0.9
3,182,789	-				+0.1
3,182,795	-				-0.9
3,182,876	+				-0.1
3,182,876	+				-1.4
3,182,876	+				+0.7
3,182,876	+				+0.7
3,182,876	+				-0.0
3,182,877	-				-1.8
3,182,877	-				+1.4
3,182,877	-				-0.3