Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_12945

Experiment: Sisomicin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.001 mg/ml
2,946,512	+				+0.3
2,946,518	+				-0.2
2,946,518	+				+0.9
2,946,519	-				+1.2
2,946,532	+				-0.2
2,946,532	+				+1.2
2,946,565	+				+0.8
2,946,610	-				+1.0
2,946,888	+		AO356_12945	0.37	+2.1
2,946,903	+		AO356_12945	0.39	+2.2
2,946,903	+		AO356_12945	0.39	+2.7
2,946,904	-		AO356_12945	0.39	+2.6
2,947,200	+		AO356_12945	0.70	+1.6
2,947,201	-		AO356_12945	0.70	+2.9
2,947,201	-		AO356_12945	0.70	+2.1
2,947,201	-		AO356_12945	0.70	+3.2
2,947,201	-		AO356_12945	0.70	+1.0
2,947,231	-		AO356_12945	0.73	+3.1
2,947,380	+		AO356_12945	0.88	+2.9
2,947,407	+				+2.8
2,947,407	+				+3.4
2,947,407	+				+1.2
2,947,407	+				+2.5
2,947,407	+				+2.3
2,947,407	+				+3.1
2,947,407	+				+1.7
2,947,408	-				+1.5
2,947,408	-				+2.6
2,947,408	-				+3.2
2,947,408	-				+1.8
2,947,408	-				+1.4
2,947,408	-				+1.5
2,947,408	-				+2.7
2,947,408	-				+1.2
2,947,408	-				+2.4
2,947,468	+				+0.5
2,947,468	+				+0.5
2,947,468	+				+2.6
2,947,468	+				+1.3
2,947,468	+				+1.5
2,947,468	+				+1.6
2,947,468	+				+1.3
2,947,468	+				+0.8
2,947,468	+				+2.0
2,947,468	+				+2.1
2,947,468	+				+1.8
2,947,468	+				+1.0
2,947,469	-				+2.1
2,947,469	-				+0.4
2,947,469	-				+1.6
2,947,469	-				+2.9
2,947,469	-				+2.7
2,947,469	-				+0.6
2,947,469	-				+2.0
2,947,476	+				+1.6
2,947,477	-				+1.5
2,947,477	-				+0.9
2,947,477	-				+0.1
2,947,534	-				-0.5
2,947,595	+				-0.5
2,947,595	+				+1.2
2,947,595	+				-0.3
2,947,595	+				+0.4
2,947,595	+				+0.0
2,947,595	+				-0.6
2,947,595	+				-0.7
2,947,595	+				+0.7
2,947,595	+				-1.9
2,947,595	+				-0.3
2,947,596	-				+0.4
2,947,596	-				+2.5
2,947,596	-				+0.3
2,947,596	-				-0.8
2,947,596	-				+1.5
2,947,654	+				-0.4
2,947,654	+				-0.9
2,947,654	+				+0.7
2,947,655	-				-0.2
2,947,655	-				+0.4
2,947,655	-				+0.4
2,947,655	-				-1.2
2,947,655	-				+1.3
2,947,656	+				+0.7
2,947,656	+				+0.0
2,947,656	+				-0.3
2,947,656	+				+0.1
2,947,656	+				-0.9
2,947,657	-				+0.3
2,947,657	-				-0.4
2,947,657	-				-1.1
2,947,657	-				+0.4
2,947,657	-				+0.3
2,947,657	-				-1.7
2,947,657	-				+0.2
2,947,657	-				+0.2
2,947,664	+				-0.3
2,947,665	-				-0.3
2,947,710	+				-0.4
2,947,710	+				+0.6
2,947,710	+				+0.5
2,947,710	+				-0.3
2,947,710	+				-1.4
2,947,711	-				-0.6
2,947,711	-				-0.2
2,947,711	-				+1.2
2,947,711	-				-0.4
2,947,714	+				-0.3
2,947,715	-				-0.5
2,947,715	-				+0.5
2,947,732	+				+1.4
2,947,732	+				-0.1
2,947,732	+				-0.6
2,947,732	+				-0.9
2,947,732	+				-0.4
2,947,732	+				-0.3
2,947,732	+				-0.5
2,947,733	-				+0.4
2,947,733	-				-1.3
2,947,733	-				-0.8
2,947,749	+				-0.3
2,947,840	+				+1.0
2,947,840	+				-0.0
2,947,840	+				+1.5
2,947,841	-				+0.5
2,947,841	-				+0.8
2,947,853	+				-1.0
2,947,854	-				-0.8
2,947,854	-				-0.0
2,948,027	+		AO356_12950	0.31	-0.4
2,948,028	-		AO356_12950	0.32	-2.2
2,948,042	+		AO356_12950	0.34	-0.0
2,948,042	+		AO356_12950	0.34	+0.4
2,948,043	-		AO356_12950	0.34	-0.1
2,948,043	-		AO356_12950	0.34	+0.3
2,948,043	-		AO356_12950	0.34	+0.2
2,948,043	-		AO356_12950	0.34	+0.1
2,948,043	-		AO356_12950	0.34	+0.9
2,948,132	+		AO356_12950	0.47	-0.6
2,948,204	+		AO356_12950	0.58	+0.2
2,948,291	+		AO356_12950	0.71	-2.4
2,948,291	+		AO356_12950	0.71	+0.5
2,948,292	-		AO356_12950	0.71	-1.0
2,948,292	-		AO356_12950	0.71	-0.8
2,948,369	+		AO356_12950	0.83	-0.4
2,948,369	+		AO356_12950	0.83	-1.6
2,948,491	+				-1.2