Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_12880

Experiment: Sisomicin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.001 mg/ml
2,931,115	-		AO356_12870	0.84	-0.2
2,931,235	+				+0.6
2,931,235	+				+0.3
2,931,235	+				-0.5
2,931,235	+				-2.2
2,931,236	-				-0.8
2,931,236	-				-0.1
2,931,236	-				+0.6
2,931,236	-				-0.7
2,931,236	-				+1.2
2,931,236	-				-0.3
2,931,236	-				-0.2
2,931,236	-				+1.3
2,931,236	-				-1.5
2,931,236	-				-0.4
2,931,236	-				+0.5
2,931,253	+				-1.0
2,931,254	-				-0.0
2,931,310	+				+2.7
2,931,310	+				-0.8
2,931,310	+				-1.3
2,931,310	+				+0.2
2,931,311	-				+0.4
2,931,311	-				-0.2
2,931,311	-				-0.3
2,931,400	+		AO356_12875	0.14	+0.6
2,931,400	+		AO356_12875	0.14	+1.0
2,931,400	+		AO356_12875	0.14	+2.2
2,931,400	+		AO356_12875	0.14	+0.0
2,931,400	+		AO356_12875	0.14	-0.2
2,931,400	+		AO356_12875	0.14	+0.5
2,931,400	+		AO356_12875	0.14	-0.8
2,931,400	+		AO356_12875	0.14	+0.5
2,931,400	+		AO356_12875	0.14	-0.7
2,931,400	+		AO356_12875	0.14	-0.7
2,931,400	+		AO356_12875	0.14	-0.2
2,931,400	+		AO356_12875	0.14	-0.7
2,931,400	+		AO356_12875	0.14	+1.4
2,931,400	+		AO356_12875	0.14	+0.4
2,931,400	+		AO356_12875	0.14	+0.2
2,931,401	-		AO356_12875	0.14	+1.4
2,931,401	-		AO356_12875	0.14	-0.1
2,931,401	-		AO356_12875	0.14	-0.4
2,931,401	-		AO356_12875	0.14	+0.8
2,931,401	-		AO356_12875	0.14	-3.4
2,931,542	-		AO356_12875	0.35	-1.8
2,931,542	-		AO356_12875	0.35	-0.0
2,931,591	-		AO356_12875	0.42	-0.1
2,931,702	+		AO356_12875	0.59	+0.1
2,931,750	+		AO356_12875	0.66	+0.5
2,931,750	+		AO356_12875	0.66	-0.6
2,931,751	-		AO356_12875	0.66	-0.3
2,931,751	-		AO356_12875	0.66	-0.1
2,931,934	+				-0.8
2,931,935	-				+1.2
2,931,935	-				+1.1
2,932,003	+				-1.2
2,932,004	-				-0.4
2,932,011	+				+0.9
2,932,011	+				-0.1
2,932,014	+				+0.4
2,932,014	+				+0.8
2,932,014	+				-0.6
2,932,014	+				+0.3
2,932,014	+				+1.9
2,932,015	-				+1.2
2,932,015	-				+1.0
2,932,015	-				-0.4
2,932,051	+				-0.2
2,932,051	+				+0.7
2,932,051	+				+1.2
2,932,051	+				+1.0
2,932,051	+				+1.0
2,932,052	-				+1.5
2,932,052	-				+1.6
2,932,057	+				+0.2
2,932,057	+				+0.9
2,932,057	+				-0.2
2,932,057	+				+0.5
2,932,057	+				+0.1
2,932,057	+				+1.3
2,932,057	+				+0.2
2,932,058	-				+1.1
2,932,058	-				-0.4
2,932,058	-				+1.0
2,932,070	-				+2.1
2,932,070	-				+0.7
2,932,116	+				-0.5
2,932,116	+				-0.5
2,932,116	+				+0.3
2,932,116	+				+0.4
2,932,117	-				+1.7
2,932,117	-				+1.9
2,932,117	-				+1.1
2,932,278	+		AO356_12880	0.14	+0.6
2,932,278	+		AO356_12880	0.14	+0.7
2,932,278	+		AO356_12880	0.14	-1.3
2,932,278	+		AO356_12880	0.14	+1.9
2,932,278	+		AO356_12880	0.14	+0.3
2,932,279	-		AO356_12880	0.14	+0.1
2,932,279	-		AO356_12880	0.14	-1.6
2,932,279	-		AO356_12880	0.14	+1.4
2,932,279	-		AO356_12880	0.14	+2.1
2,932,279	-		AO356_12880	0.14	+0.3
2,932,279	-		AO356_12880	0.14	+0.1
2,932,279	-		AO356_12880	0.14	-0.3
2,932,279	-		AO356_12880	0.14	+0.5
2,932,279	-		AO356_12880	0.14	-0.3
2,932,359	+		AO356_12880	0.21	+0.5
2,932,359	+		AO356_12880	0.21	+0.9
2,932,359	+		AO356_12880	0.21	+0.3
2,932,359	+		AO356_12880	0.21	+1.4
2,932,359	+		AO356_12880	0.21	+2.2
2,932,360	-		AO356_12880	0.21	-0.7
2,932,360	-		AO356_12880	0.21	+1.1
2,932,371	+		AO356_12880	0.22	+0.4
2,932,371	+		AO356_12880	0.22	-0.3
2,932,371	+		AO356_12880	0.22	+0.2
2,932,371	+		AO356_12880	0.22	+1.3
2,932,371	+		AO356_12880	0.22	+1.0
2,932,371	+		AO356_12880	0.22	+1.0
2,932,372	-		AO356_12880	0.22	-0.6
2,932,372	-		AO356_12880	0.22	+1.8
2,932,372	-		AO356_12880	0.22	+0.1
2,932,372	-		AO356_12880	0.22	+0.7
2,932,372	-		AO356_12880	0.22	+0.4
2,932,374	+		AO356_12880	0.22	-0.5
2,932,374	+		AO356_12880	0.22	-0.7
2,932,374	+		AO356_12880	0.22	+0.7
2,932,374	+		AO356_12880	0.22	+1.1
2,932,374	+		AO356_12880	0.22	+0.4
2,932,374	+		AO356_12880	0.22	-0.6
2,932,375	-		AO356_12880	0.22	+0.2
2,932,375	-		AO356_12880	0.22	-0.8
2,932,375	-		AO356_12880	0.22	-0.6
2,932,449	+		AO356_12880	0.28	+0.2
2,932,449	+		AO356_12880	0.28	-0.4
2,932,449	+		AO356_12880	0.28	+1.1
2,932,449	+		AO356_12880	0.28	+1.3
2,932,450	-		AO356_12880	0.28	+0.6
2,932,450	-		AO356_12880	0.28	-1.1
2,932,450	-		AO356_12880	0.28	+0.6
2,932,509	+		AO356_12880	0.33	-1.8
2,932,509	+		AO356_12880	0.33	+0.6
2,932,509	+		AO356_12880	0.33	+2.0
2,932,509	+		AO356_12880	0.33	+0.4
2,932,509	+		AO356_12880	0.33	+1.2
2,932,509	+		AO356_12880	0.33	-0.8
2,932,509	+		AO356_12880	0.33	+1.5
2,932,510	-		AO356_12880	0.33	+1.0
2,932,510	-		AO356_12880	0.33	+0.5
2,932,510	-		AO356_12880	0.33	+0.4
2,932,578	+		AO356_12880	0.39	-0.4
2,932,579	-		AO356_12880	0.39	-2.2
2,932,579	-		AO356_12880	0.39	-0.8
2,932,683	+		AO356_12880	0.47	+0.0
2,932,683	+		AO356_12880	0.47	+0.1
2,932,684	-		AO356_12880	0.47	+0.4
2,932,684	-		AO356_12880	0.47	-0.6
2,932,684	-		AO356_12880	0.47	-0.1
2,932,684	-		AO356_12880	0.47	+1.3
2,932,698	+		AO356_12880	0.48	-0.0
2,932,699	-		AO356_12880	0.48	+0.6
2,932,699	-		AO356_12880	0.48	+0.9
2,932,715	+		AO356_12880	0.50	+0.5
2,932,715	+		AO356_12880	0.50	+0.4
2,932,716	-		AO356_12880	0.50	+1.5
2,932,716	-		AO356_12880	0.50	-1.5
2,932,716	-		AO356_12880	0.50	+0.5
2,932,716	-		AO356_12880	0.50	+1.0
2,932,716	-		AO356_12880	0.50	-1.5
2,932,716	-		AO356_12880	0.50	+0.9
2,932,716	-		AO356_12880	0.50	-0.1
2,932,729	+		AO356_12880	0.51	+0.6
2,932,729	+		AO356_12880	0.51	-1.8
2,932,729	+		AO356_12880	0.51	-0.5
2,932,729	+		AO356_12880	0.51	+0.2
2,932,729	+		AO356_12880	0.51	-0.3
2,932,729	+		AO356_12880	0.51	+0.6
2,932,729	+		AO356_12880	0.51	-0.7
2,932,729	+		AO356_12880	0.51	+0.6
2,932,730	-		AO356_12880	0.51	+0.9
2,932,730	-		AO356_12880	0.51	+1.6
2,932,830	+		AO356_12880	0.59	+0.5
2,932,830	+		AO356_12880	0.59	-0.3
2,932,830	+		AO356_12880	0.59	+1.0
2,932,830	+		AO356_12880	0.59	+0.8
2,932,830	+		AO356_12880	0.59	+0.1
2,932,830	+		AO356_12880	0.59	+1.3
2,932,830	+		AO356_12880	0.59	+0.9
2,932,830	+		AO356_12880	0.59	+0.2
2,932,830	+		AO356_12880	0.59	+1.4
2,932,830	+		AO356_12880	0.59	-0.3
2,932,830	+		AO356_12880	0.59	+1.2
2,932,830	+		AO356_12880	0.59	+1.5
2,932,830	+		AO356_12880	0.59	-0.7
2,932,831	-		AO356_12880	0.59	+0.9
2,932,831	-		AO356_12880	0.59	+0.6
2,932,831	-		AO356_12880	0.59	-0.8
2,932,831	-		AO356_12880	0.59	-1.2
2,932,831	-		AO356_12880	0.59	-0.7
2,932,831	-		AO356_12880	0.59	+0.5
2,932,831	-		AO356_12880	0.59	-1.3
2,932,831	-		AO356_12880	0.59	+1.1
2,932,831	-		AO356_12880	0.59	+0.7
2,932,831	-		AO356_12880	0.59	+0.5
2,932,831	-		AO356_12880	0.59	-0.4
2,932,831	-		AO356_12880	0.59	-0.1
2,932,831	-		AO356_12880	0.59	+1.9
2,932,831	-		AO356_12880	0.59	+0.6
2,932,831	-		AO356_12880	0.59	+1.9
2,932,840	+		AO356_12880	0.60	+0.2
2,932,840	+		AO356_12880	0.60	+1.0
2,932,840	+		AO356_12880	0.60	-0.6
2,932,841	-		AO356_12880	0.60	-0.6
2,932,841	-		AO356_12880	0.60	+1.0
2,933,007	+		AO356_12880	0.73	-0.1
2,933,007	+		AO356_12880	0.73	-0.3
2,933,007	+		AO356_12880	0.73	+0.9
2,933,007	+		AO356_12880	0.73	-0.1
2,933,007	+		AO356_12880	0.73	-0.0
2,933,007	+		AO356_12880	0.73	+0.4
2,933,007	+		AO356_12880	0.73	+0.1
2,933,008	-		AO356_12880	0.73	-0.6
2,933,008	-		AO356_12880	0.73	+0.6
2,933,008	-		AO356_12880	0.73	+0.1
2,933,031	+		AO356_12880	0.75	+1.8
2,933,031	+		AO356_12880	0.75	+1.2
2,933,031	+		AO356_12880	0.75	+1.3
2,933,031	+		AO356_12880	0.75	+1.4
2,933,031	+		AO356_12880	0.75	+3.2
2,933,031	+		AO356_12880	0.75	+2.4
2,933,031	+		AO356_12880	0.75	-0.0
2,933,031	+		AO356_12880	0.75	+2.1
2,933,032	-		AO356_12880	0.75	+0.1
2,933,032	-		AO356_12880	0.75	+0.6
2,933,032	-		AO356_12880	0.75	-2.4
2,933,032	-		AO356_12880	0.75	+1.1
2,933,032	-		AO356_12880	0.75	-0.1
2,933,032	-		AO356_12880	0.75	+0.7
2,933,032	-		AO356_12880	0.75	+1.6
2,933,049	+		AO356_12880	0.77	-1.3
2,933,049	+		AO356_12880	0.77	+0.2
2,933,049	+		AO356_12880	0.77	+0.4
2,933,050	-		AO356_12880	0.77	+0.1
2,933,050	-		AO356_12880	0.77	+1.2
2,933,271	+				+0.9
2,933,271	+				+0.6
2,933,271	+				+1.0
2,933,271	+				-0.5
2,933,271	+				+1.2
2,933,272	-				-1.5
2,933,298	+				-1.5
2,933,298	+				+0.2
2,933,298	+				+0.6
2,933,298	+				-2.8
2,933,299	-				+2.6
2,933,299	-				+0.8
2,933,299	-				+1.0
2,933,299	-				+4.2
2,933,299	-				+0.1
2,933,299	-				+1.0
2,933,334	+				+1.8
2,933,334	+				+1.7
2,933,334	+				+1.3
2,933,334	+				+1.2
2,933,335	-				+1.4
2,933,469	-		AO356_12885	0.24	-0.1
2,933,469	-		AO356_12885	0.24	+0.0
2,933,469	-		AO356_12885	0.24	+2.1
2,933,469	-		AO356_12885	0.24	+2.2
2,933,577	-		AO356_12885	0.42	+0.7
2,933,765	+		AO356_12885	0.72	+0.9
2,933,765	+		AO356_12885	0.72	+1.3
2,933,765	+		AO356_12885	0.72	+0.6
2,933,765	+		AO356_12885	0.72	+0.6
2,933,766	-		AO356_12885	0.72	+1.7
2,933,786	+		AO356_12885	0.75	-0.3
2,933,829	+		AO356_12885	0.82	+1.0
2,933,829	+		AO356_12885	0.82	+2.3
2,933,829	+		AO356_12885	0.82	+1.1
2,933,829	+		AO356_12885	0.82	-0.2
2,933,829	+		AO356_12885	0.82	+1.9
2,933,829	+		AO356_12885	0.82	+2.5
2,933,829	+		AO356_12885	0.82	+0.6
2,933,829	+		AO356_12885	0.82	+2.0
2,933,830	-		AO356_12885	0.82	+2.0
2,933,830	-		AO356_12885	0.82	+0.5
2,933,830	-		AO356_12885	0.82	+1.4
2,933,830	-		AO356_12885	0.82	+1.1
2,933,831	+		AO356_12885	0.82	+2.2
2,933,831	+		AO356_12885	0.82	+2.2
2,933,831	+		AO356_12885	0.82	+1.2
2,933,831	+		AO356_12885	0.82	+2.8
2,933,831	+		AO356_12885	0.82	+2.1
2,933,831	+		AO356_12885	0.82	+0.9
2,933,831	+		AO356_12885	0.82	+1.0
2,933,832	-		AO356_12885	0.83	+1.3
2,933,832	-		AO356_12885	0.83	+2.3
2,933,832	-		AO356_12885	0.83	+1.8
2,933,832	-		AO356_12885	0.83	+2.3
2,933,909	+				+1.4
2,933,910	-				+1.2
2,933,973	+				+2.3
2,933,974	-				+2.0
2,933,974	-				+0.6
2,933,974	-				+0.3
2,933,999	+				+0.3
2,934,000	-				+1.2
2,934,000	-				+2.2
2,934,030	+				+2.0
2,934,030	+				+1.0
2,934,030	+				+2.1
2,934,091	+				+1.0
2,934,091	+				+2.9
2,934,092	-				+1.3
2,934,092	-				+2.2
2,934,092	-				+1.6
2,934,092	-				+1.9
2,934,092	-				+1.0
2,934,092	-				+1.8
2,934,102	+				+1.8
2,934,102	+				+1.0
2,934,102	+				+1.1
2,934,103	-				+1.2
2,934,103	-				+1.0
2,934,103	-				+0.8
2,934,103	-				+0.9
2,934,104	+				+0.5
2,934,104	+				+0.9
2,934,104	+				+1.1
2,934,104	+				+0.2
2,934,105	-				+1.7
2,934,105	-				+0.9
2,934,105	-				+1.2
2,934,105	-				+1.5
2,934,105	-				+1.8
2,934,105	-				+0.9
2,934,105	-				+1.2
2,934,105	-				+1.1
2,934,105	-				+2.4
2,934,105	-				+1.2
2,934,105	-				+1.6
2,934,153	+				+0.5
2,934,270	-		AO356_12890	0.12	+1.3