Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_12820

Experiment: Sisomicin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.001 mg/ml
2,919,329	+		AO356_12815	0.12	-1.3
2,919,329	+		AO356_12815	0.12	+0.8
2,919,330	-		AO356_12815	0.12	-0.4
2,919,330	-		AO356_12815	0.12	+0.3
2,919,330	-		AO356_12815	0.12	-1.5
2,919,480	+		AO356_12815	0.35	-1.8
2,919,481	-		AO356_12815	0.35	+1.0
2,919,481	-		AO356_12815	0.35	+1.0
2,919,482	+		AO356_12815	0.35	-1.6
2,919,482	+		AO356_12815	0.35	+0.1
2,919,482	+		AO356_12815	0.35	+0.4
2,919,482	+		AO356_12815	0.35	-1.6
2,919,482	+		AO356_12815	0.35	+1.5
2,919,482	+		AO356_12815	0.35	-0.5
2,919,482	+		AO356_12815	0.35	-1.2
2,919,482	+		AO356_12815	0.35	-0.6
2,919,482	+		AO356_12815	0.35	+1.0
2,919,482	+		AO356_12815	0.35	-0.7
2,919,482	+		AO356_12815	0.35	+0.3
2,919,483	-		AO356_12815	0.35	+1.2
2,919,483	-		AO356_12815	0.35	-0.5
2,919,483	-		AO356_12815	0.35	-0.6
2,919,483	-		AO356_12815	0.35	-1.3
2,919,483	-		AO356_12815	0.35	-0.7
2,919,483	-		AO356_12815	0.35	+0.4
2,919,483	-		AO356_12815	0.35	+0.0
2,919,483	-		AO356_12815	0.35	+0.1
2,919,483	-		AO356_12815	0.35	-0.0
2,919,483	-		AO356_12815	0.35	+0.3
2,919,483	-		AO356_12815	0.35	+0.1
2,919,483	-		AO356_12815	0.35	-0.8
2,919,483	-		AO356_12815	0.35	+1.2
2,919,728	+		AO356_12815	0.72	-1.0
2,919,728	+		AO356_12815	0.72	+0.1
2,919,729	-		AO356_12815	0.72	-1.1
2,919,729	-		AO356_12815	0.72	+0.2
2,919,729	-		AO356_12815	0.72	-2.2
2,919,818	+		AO356_12815	0.86	-0.2
2,919,819	-		AO356_12815	0.86	-0.0
2,919,819	-		AO356_12815	0.86	+0.4
2,919,892	+				-0.2
2,919,893	-				+0.4
2,919,893	-				-1.4
2,919,893	-				-1.1
2,919,942	+				+0.2
2,919,942	+				+0.5
2,919,942	+				+2.0
2,919,942	+				-0.5
2,919,942	+				-0.7
2,919,942	+				+0.9
2,919,942	+				-1.0
2,919,942	+				+1.0
2,919,942	+				+0.7
2,919,942	+				-1.1
2,919,942	+				-0.3
2,919,943	-				-0.3
2,919,956	+				-0.1
2,919,962	+				-0.1
2,919,962	+				+0.2
2,919,962	+				-0.6
2,919,962	+				+1.0
2,919,962	+				+0.1
2,919,962	+				+1.4
2,919,962	+				-1.1
2,919,962	+				+0.0
2,919,962	+				-0.8
2,919,962	+				+1.8
2,919,963	-				-0.5
2,919,963	-				-0.7
2,919,963	-				+0.2
2,919,963	-				-0.4
2,920,027	+				-0.5
2,920,027	+				+0.0
2,920,027	+				-0.6
2,920,027	+				-0.6
2,920,027	+				+1.2
2,920,028	-				-0.5
2,920,028	-				-0.6
2,920,028	-				-0.6
2,920,066	+				+1.3
2,920,066	+				-0.5
2,920,066	+				-0.8
2,920,066	+				-1.5
2,920,066	+				+0.2
2,920,066	+				+0.4
2,920,067	-				+1.1
2,920,067	-				-0.1
2,920,067	-				-0.1
2,920,067	-				-0.1
2,920,067	-				-1.5
2,920,067	-				-1.4
2,920,069	+				+0.5
2,920,069	+				-1.2
2,920,069	+				+1.0
2,920,069	+				-0.7
2,920,070	-				-0.5
2,920,070	-				+0.0
2,920,070	-				-1.2
2,920,070	-				-0.8
2,920,070	-				-0.9
2,920,070	-				+0.3
2,920,070	-				-0.7
2,920,098	+				-1.4
2,920,098	+				-1.1
2,920,098	+				-1.0
2,920,099	-				+0.0
2,920,099	-				+0.1
2,920,099	-				-0.3
2,920,099	-				-1.5
2,920,099	-				-0.1
2,920,099	-				+1.0
2,920,127	-				+0.4
2,920,127	-				+0.2
2,920,405	-		AO356_12820	0.25	+0.6
2,920,545	-		AO356_12820	0.37	+0.4
2,920,751	-		AO356_12820	0.54	-0.9
2,920,763	+		AO356_12820	0.55	+1.5
2,920,763	+		AO356_12820	0.55	-0.3
2,920,764	-		AO356_12820	0.55	-0.5
2,920,764	-		AO356_12820	0.55	-0.7
2,920,796	-		AO356_12820	0.57	+1.2
2,920,796	-		AO356_12820	0.57	+0.3
2,920,796	-		AO356_12820	0.57	-0.1
2,920,811	+		AO356_12820	0.59	+0.3
2,920,811	+		AO356_12820	0.59	-2.0
2,920,811	+		AO356_12820	0.59	-0.0
2,920,857	-		AO356_12820	0.62	-1.0
2,921,282	+				+0.5
2,921,283	-				-1.3
2,921,307	+				-0.6
2,921,307	+				+0.1
2,921,307	+				+0.9
2,921,307	+				-0.8
2,921,307	+				-0.2
2,921,308	-				-0.9
2,921,308	-				+0.3
2,921,308	-				+0.5
2,921,330	+				+0.2
2,921,330	+				+1.5
2,921,330	+				-0.7
2,921,331	-				+0.4
2,921,390	+		AO356_12825	0.18	+0.1
2,921,568	-		AO356_12825	0.56	-0.3
2,921,733	+				-0.7
2,921,733	+				+0.2
2,921,733	+				+1.0
2,921,733	+				-0.2
2,921,733	+				-0.0
2,921,733	+				+2.5
2,921,733	+				-1.2
2,921,733	+				+2.2
2,921,734	-				-0.9
2,921,776	+				-0.5
2,921,777	-				-0.6
2,921,777	-				+0.3
2,921,804	+				+0.5
2,921,804	+				-1.7
2,921,805	-				-0.1
2,921,820	+				-0.5
2,921,820	+				-2.3
2,921,820	+				-0.6
2,921,820	+				+0.7
2,921,820	+				+0.6
2,921,820	+				+0.2
2,921,820	+				+0.6
2,921,821	-				-0.1
2,921,821	-				+1.6
2,921,821	-				-0.5
2,921,821	-				-0.3
2,921,846	+				+2.1
2,921,847	-				+1.1
2,921,870	+				+1.2
2,921,871	-				+0.3
2,921,871	-				+0.6
2,922,016	-		AO356_12830	0.10	-0.8
2,922,067	+		AO356_12830	0.13	+1.1
2,922,067	+		AO356_12830	0.13	+1.6
2,922,067	+		AO356_12830	0.13	+1.4
2,922,067	+		AO356_12830	0.13	+1.2
2,922,068	-		AO356_12830	0.13	+0.8
2,922,068	-		AO356_12830	0.13	+0.3
2,922,068	-		AO356_12830	0.13	+0.7
2,922,068	-		AO356_12830	0.13	+0.2
2,922,068	-		AO356_12830	0.13	+1.6
2,922,187	+		AO356_12830	0.19	+1.5
2,922,189	+		AO356_12830	0.19	+1.3
2,922,189	+		AO356_12830	0.19	+1.3
2,922,190	-		AO356_12830	0.19	+1.9
2,922,235	-		AO356_12830	0.22	+1.3
2,922,235	-		AO356_12830	0.22	+0.6