Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_12815

Experiment: Sisomicin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.001 mg/ml
2,918,459	+		AO356_12805	0.85	+0.7
2,918,459	+		AO356_12805	0.85	+0.9
2,918,459	+		AO356_12805	0.85	+0.5
2,918,459	+		AO356_12805	0.85	-0.2
2,918,459	+		AO356_12805	0.85	+0.0
2,918,459	+		AO356_12805	0.85	-1.2
2,918,460	-		AO356_12805	0.85	+0.0
2,918,460	-		AO356_12805	0.85	-0.7
2,918,460	-		AO356_12805	0.85	-1.0
2,918,460	-		AO356_12805	0.85	-0.7
2,918,494	-				-1.1
2,918,494	-				-0.7
2,918,540	+				-0.2
2,918,541	-				-0.7
2,918,541	-				-0.1
2,918,550	+				-1.4
2,918,550	+				-0.4
2,918,550	+				-2.2
2,918,550	+				+1.2
2,918,550	+				-0.4
2,918,550	+				+0.7
2,918,550	+				-2.4
2,918,551	-				-1.7
2,918,551	-				+0.6
2,918,551	-				-1.4
2,918,559	+				-0.3
2,918,559	+				-1.5
2,918,560	-				-0.2
2,918,560	-				-1.5
2,918,570	+				+0.4
2,918,570	+				-0.1
2,918,570	+				+0.2
2,918,571	-				+1.4
2,918,597	+				+0.6
2,918,597	+				-0.0
2,918,598	-				+1.0
2,918,598	-				-2.2
2,918,616	+				-1.0
2,918,616	+				+1.1
2,918,814	+		AO356_12810	0.21	+0.7
2,918,895	+		AO356_12810	0.39	+0.7
2,918,895	+		AO356_12810	0.39	-0.3
2,918,895	+		AO356_12810	0.39	+1.1
2,918,895	+		AO356_12810	0.39	+2.3
2,918,895	+		AO356_12810	0.39	+1.7
2,918,895	+		AO356_12810	0.39	+0.4
2,918,895	+		AO356_12810	0.39	+1.9
2,918,895	+		AO356_12810	0.39	-0.4
2,918,895	+		AO356_12810	0.39	+0.6
2,918,895	+		AO356_12810	0.39	-0.6
2,918,895	+		AO356_12810	0.39	+0.3
2,918,895	+		AO356_12810	0.39	+0.3
2,918,896	-		AO356_12810	0.39	+0.0
2,918,896	-		AO356_12810	0.39	+1.5
2,918,896	-		AO356_12810	0.39	+0.7
2,918,896	-		AO356_12810	0.39	+0.2
2,918,896	-		AO356_12810	0.39	-1.1
2,918,896	-		AO356_12810	0.39	+1.2
2,918,896	-		AO356_12810	0.39	-1.1
2,918,896	-		AO356_12810	0.39	-0.9
2,918,896	-		AO356_12810	0.39	+0.6
2,918,896	-		AO356_12810	0.39	+0.3
2,918,896	-		AO356_12810	0.39	-0.9
2,918,896	-		AO356_12810	0.39	-0.7
2,918,896	-		AO356_12810	0.39	+0.8
2,918,896	-		AO356_12810	0.39	-1.0
2,918,920	+		AO356_12810	0.44	+0.3
2,918,920	+		AO356_12810	0.44	-1.2
2,918,920	+		AO356_12810	0.44	-0.5
2,918,921	-		AO356_12810	0.44	-0.4
2,918,921	-		AO356_12810	0.44	+0.2
2,918,922	+		AO356_12810	0.44	-1.6
2,918,922	+		AO356_12810	0.44	-0.6
2,918,922	+		AO356_12810	0.44	+0.5
2,918,922	+		AO356_12810	0.44	-0.8
2,918,922	+		AO356_12810	0.44	-0.3
2,918,922	+		AO356_12810	0.44	-0.3
2,918,922	+		AO356_12810	0.44	-0.1
2,918,922	+		AO356_12810	0.44	+0.3
2,918,922	+		AO356_12810	0.44	-0.4
2,918,922	+		AO356_12810	0.44	-0.0
2,918,922	+		AO356_12810	0.44	-2.4
2,918,922	+		AO356_12810	0.44	-0.8
2,918,923	-		AO356_12810	0.45	-1.1
2,918,923	-		AO356_12810	0.45	+0.5
2,918,923	-		AO356_12810	0.45	-0.1
2,918,923	-		AO356_12810	0.45	-0.5
2,918,923	-		AO356_12810	0.45	-0.1
2,918,923	-		AO356_12810	0.45	-0.5
2,918,923	-		AO356_12810	0.45	+0.6
2,918,923	-		AO356_12810	0.45	+0.3
2,918,923	-		AO356_12810	0.45	-1.0
2,918,923	-		AO356_12810	0.45	+0.6
2,918,923	-		AO356_12810	0.45	-0.6
2,918,991	+		AO356_12810	0.59	+0.6
2,919,329	+		AO356_12815	0.12	-1.3
2,919,329	+		AO356_12815	0.12	+0.8
2,919,330	-		AO356_12815	0.12	-0.4
2,919,330	-		AO356_12815	0.12	+0.3
2,919,330	-		AO356_12815	0.12	-1.5
2,919,480	+		AO356_12815	0.35	-1.8
2,919,481	-		AO356_12815	0.35	+1.0
2,919,481	-		AO356_12815	0.35	+1.0
2,919,482	+		AO356_12815	0.35	-1.6
2,919,482	+		AO356_12815	0.35	+0.1
2,919,482	+		AO356_12815	0.35	+0.4
2,919,482	+		AO356_12815	0.35	-1.6
2,919,482	+		AO356_12815	0.35	+1.5
2,919,482	+		AO356_12815	0.35	-0.5
2,919,482	+		AO356_12815	0.35	-1.2
2,919,482	+		AO356_12815	0.35	-0.6
2,919,482	+		AO356_12815	0.35	+1.0
2,919,482	+		AO356_12815	0.35	-0.7
2,919,482	+		AO356_12815	0.35	+0.3
2,919,483	-		AO356_12815	0.35	+1.2
2,919,483	-		AO356_12815	0.35	-0.5
2,919,483	-		AO356_12815	0.35	-0.6
2,919,483	-		AO356_12815	0.35	-1.3
2,919,483	-		AO356_12815	0.35	-0.7
2,919,483	-		AO356_12815	0.35	+0.4
2,919,483	-		AO356_12815	0.35	+0.0
2,919,483	-		AO356_12815	0.35	+0.1
2,919,483	-		AO356_12815	0.35	-0.0
2,919,483	-		AO356_12815	0.35	+0.3
2,919,483	-		AO356_12815	0.35	+0.1
2,919,483	-		AO356_12815	0.35	-0.8
2,919,483	-		AO356_12815	0.35	+1.2
2,919,728	+		AO356_12815	0.72	-1.0
2,919,728	+		AO356_12815	0.72	+0.1
2,919,729	-		AO356_12815	0.72	-1.1
2,919,729	-		AO356_12815	0.72	+0.2
2,919,729	-		AO356_12815	0.72	-2.2
2,919,818	+		AO356_12815	0.86	-0.2
2,919,819	-		AO356_12815	0.86	-0.0
2,919,819	-		AO356_12815	0.86	+0.4
2,919,892	+				-0.2
2,919,893	-				+0.4
2,919,893	-				-1.4
2,919,893	-				-1.1
2,919,942	+				+0.2
2,919,942	+				+0.5
2,919,942	+				+2.0
2,919,942	+				-0.5
2,919,942	+				-0.7
2,919,942	+				+0.9
2,919,942	+				-1.0
2,919,942	+				+1.0
2,919,942	+				+0.7
2,919,942	+				-1.1
2,919,942	+				-0.3
2,919,943	-				-0.3
2,919,956	+				-0.1
2,919,962	+				-0.1
2,919,962	+				+0.2
2,919,962	+				-0.6
2,919,962	+				+1.0
2,919,962	+				+0.1
2,919,962	+				+1.4
2,919,962	+				-1.1
2,919,962	+				+0.0
2,919,962	+				-0.8
2,919,962	+				+1.8
2,919,963	-				-0.5
2,919,963	-				-0.7
2,919,963	-				+0.2
2,919,963	-				-0.4
2,920,027	+				-0.5
2,920,027	+				+0.0
2,920,027	+				-0.6
2,920,027	+				-0.6
2,920,027	+				+1.2
2,920,028	-				-0.5
2,920,028	-				-0.6
2,920,028	-				-0.6
2,920,066	+				+1.3
2,920,066	+				-0.5
2,920,066	+				-0.8
2,920,066	+				-1.5
2,920,066	+				+0.2
2,920,066	+				+0.4
2,920,067	-				+1.1
2,920,067	-				-0.1
2,920,067	-				-0.1
2,920,067	-				-0.1
2,920,067	-				-1.5
2,920,067	-				-1.4
2,920,069	+				+0.5
2,920,069	+				-1.2
2,920,069	+				+1.0
2,920,069	+				-0.7
2,920,070	-				-0.5
2,920,070	-				+0.0
2,920,070	-				-1.2
2,920,070	-				-0.8
2,920,070	-				-0.9
2,920,070	-				+0.3
2,920,070	-				-0.7
2,920,098	+				-1.4
2,920,098	+				-1.1
2,920,098	+				-1.0
2,920,099	-				+0.0
2,920,099	-				+0.1
2,920,099	-				-0.3
2,920,099	-				-1.5
2,920,099	-				-0.1
2,920,099	-				+1.0
2,920,127	-				+0.4
2,920,127	-				+0.2
2,920,405	-		AO356_12820	0.25	+0.6
2,920,545	-		AO356_12820	0.37	+0.4
2,920,751	-		AO356_12820	0.54	-0.9
2,920,763	+		AO356_12820	0.55	+1.5
2,920,763	+		AO356_12820	0.55	-0.3
2,920,764	-		AO356_12820	0.55	-0.5
2,920,764	-		AO356_12820	0.55	-0.7
2,920,796	-		AO356_12820	0.57	+1.2
2,920,796	-		AO356_12820	0.57	+0.3
2,920,796	-		AO356_12820	0.57	-0.1
2,920,811	+		AO356_12820	0.59	+0.3
2,920,811	+		AO356_12820	0.59	-2.0
2,920,811	+		AO356_12820	0.59	-0.0
2,920,857	-		AO356_12820	0.62	-1.0