Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_12520

Experiment: Sisomicin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.001 mg/ml
2,855,884	+				+0.0
2,855,884	+				+0.1
2,855,885	-				-0.6
2,855,954	+				-0.6
2,855,954	+				+0.5
2,855,954	+				+0.0
2,855,955	-				+0.9
2,855,955	-				-0.7
2,855,955	-				+0.1
2,855,964	+				-0.6
2,856,007	+				+0.5
2,856,013	+				-0.4
2,856,013	+				+1.0
2,856,013	+				-0.7
2,856,013	+				-0.1
2,856,013	+				-0.2
2,856,013	+				-0.7
2,856,013	+				-0.6
2,856,013	+				+0.4
2,856,013	+				+0.1
2,856,013	+				-0.7
2,856,013	+				-2.3
2,856,013	+				-2.0
2,856,013	+				-0.6
2,856,013	+				-1.1
2,856,013	+				+0.2
2,856,013	+				+0.5
2,856,013	+				-0.1
2,856,013	+				-1.8
2,856,013	+				+0.5
2,856,013	+				-1.5
2,856,013	+				-1.0
2,856,013	+				-1.6
2,856,014	-				+1.5
2,856,014	-				-0.3
2,856,014	-				+0.5
2,856,014	-				+0.1
2,856,014	-				-1.1
2,856,014	-				+0.5
2,856,014	-				-0.4
2,856,014	-				-0.1
2,856,014	-				+0.1
2,856,014	-				+0.2
2,856,014	-				-0.2
2,856,014	-				-0.8
2,856,014	-				+0.2
2,856,014	-				+0.4
2,856,190	+		AO356_12515	0.23	-0.4
2,856,190	+		AO356_12515	0.23	-0.9
2,856,232	+		AO356_12515	0.28	+0.3
2,856,358	+		AO356_12515	0.44	+0.2
2,856,358	+		AO356_12515	0.44	-0.1
2,856,358	+		AO356_12515	0.44	+0.4
2,856,359	-		AO356_12515	0.44	+0.0
2,856,359	-		AO356_12515	0.44	-2.0
2,856,359	-		AO356_12515	0.44	-0.6
2,856,359	-		AO356_12515	0.44	-0.8
2,856,365	-		AO356_12515	0.45	-0.3
2,856,471	+		AO356_12515	0.59	-0.6
2,856,580	+		AO356_12515	0.73	-0.3
2,856,634	+		AO356_12515	0.80	-1.2
2,856,635	-		AO356_12515	0.80	-0.4
2,856,761	+				-0.7
2,856,762	-				+0.4
2,856,791	+				-0.3
2,856,818	+				-1.3
2,856,818	+				-0.7
2,856,818	+				-1.5
2,856,818	+				-0.5
2,856,819	-				-1.9
2,856,823	+				-1.2
2,856,823	+				-1.8
2,856,824	-				-0.5
2,856,824	-				+0.7
2,856,838	+				-1.1
2,856,838	+				-1.2
2,856,838	+				-1.8
2,856,838	+				-1.3
2,856,838	+				-1.5
2,856,838	+				-3.0
2,856,839	-				+0.2
2,856,839	-				-0.1
2,856,839	-				+1.5
2,856,839	-				-0.1
2,856,839	-				-1.4
2,856,839	-				+1.5
2,856,842	+				-1.3
2,856,842	+				-1.0
2,856,846	+				+0.5
2,857,030	+		AO356_12520	0.24	-0.6
2,857,031	-		AO356_12520	0.24	-0.6
2,857,070	+		AO356_12520	0.30	+0.4
2,857,070	+		AO356_12520	0.30	-0.1
2,857,070	+		AO356_12520	0.30	-0.9
2,857,088	-		AO356_12520	0.33	-0.4
2,857,516	+				-0.5
2,857,517	-				+0.1
2,857,517	-				-0.5
2,857,517	-				+0.9
2,857,517	-				-0.3
2,857,531	-				-0.1
2,857,581	+				-0.4
2,857,581	+				+0.6
2,857,581	+				-0.3
2,857,581	+				-0.6
2,857,581	+				+0.5
2,857,581	+				-1.4
2,857,582	-				-0.6
2,857,582	-				+0.3
2,857,585	-				-0.5
2,857,585	-				+0.1
2,857,585	-				-0.6
2,857,585	-				+0.2
2,857,720	+				+0.2
2,857,720	+				+0.3
2,857,720	+				-0.2
2,857,720	+				+0.9
2,857,721	-				+0.7
2,857,721	-				-0.6
2,857,721	-				+1.0
2,857,721	-				-0.2
2,857,851	+		AO356_12525	0.18	-2.6
2,857,852	-		AO356_12525	0.18	-0.7
2,857,852	-		AO356_12525	0.18	-0.3
2,857,852	-		AO356_12525	0.18	+0.2
2,857,852	-		AO356_12525	0.18	-1.2
2,857,852	-		AO356_12525	0.18	+1.0
2,857,880	+		AO356_12525	0.21	-0.2
2,857,880	+		AO356_12525	0.21	+0.4
2,857,880	+		AO356_12525	0.21	-0.7
2,857,880	+		AO356_12525	0.21	+1.9
2,857,880	+		AO356_12525	0.21	-0.4
2,857,881	-		AO356_12525	0.21	-0.6
2,857,881	-		AO356_12525	0.21	-0.4
2,857,881	-		AO356_12525	0.21	-0.9
2,857,881	-		AO356_12525	0.21	+0.3
2,857,881	-		AO356_12525	0.21	-1.2
2,857,881	-		AO356_12525	0.21	-0.2
2,858,016	+		AO356_12525	0.36	-0.4
2,858,016	+		AO356_12525	0.36	-2.2
2,858,016	+		AO356_12525	0.36	-1.4
2,858,016	+		AO356_12525	0.36	+0.8
2,858,016	+		AO356_12525	0.36	+0.4
2,858,016	+		AO356_12525	0.36	+0.5
2,858,016	+		AO356_12525	0.36	+0.1
2,858,017	-		AO356_12525	0.36	-0.2
2,858,017	-		AO356_12525	0.36	-0.8
2,858,017	-		AO356_12525	0.36	+0.2
2,858,017	-		AO356_12525	0.36	+0.7
2,858,062	+		AO356_12525	0.41	+1.1
2,858,063	-		AO356_12525	0.41	-0.1
2,858,063	-		AO356_12525	0.41	-0.6
2,858,496	+		AO356_12525	0.89	+1.0
2,858,497	-		AO356_12525	0.89	+2.2
2,858,497	-		AO356_12525	0.89	-1.4