Experiment: Sisomicin 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_10605 and AO356_10610 are separated by 32 nucleotides AO356_10610 and AO356_10615 are separated by 356 nucleotides
AO356_10605: AO356_10605 - peptide transporter, at 2,412,520 to 2,416,086
_10605
AO356_10610: AO356_10610 - polyketide cyclase, at 2,416,119 to 2,416,583
_10610
AO356_10615: AO356_10615 - chemotaxis protein, at 2,416,940 to 2,418,820
_10615
Position (kb)
2416
2417 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2415.199 kb on + strand, within AO356_10605 at 2415.199 kb on + strand, within AO356_10605 at 2415.199 kb on + strand, within AO356_10605 at 2415.199 kb on + strand, within AO356_10605 at 2415.200 kb on - strand, within AO356_10605 at 2415.308 kb on + strand, within AO356_10605 at 2415.308 kb on + strand, within AO356_10605 at 2415.308 kb on + strand, within AO356_10605 at 2415.308 kb on + strand, within AO356_10605 at 2415.308 kb on + strand, within AO356_10605 at 2415.308 kb on + strand, within AO356_10605 at 2415.308 kb on + strand, within AO356_10605 at 2415.308 kb on + strand, within AO356_10605 at 2415.309 kb on - strand, within AO356_10605 at 2415.484 kb on + strand, within AO356_10605 at 2415.484 kb on + strand, within AO356_10605 at 2415.484 kb on + strand, within AO356_10605 at 2415.484 kb on + strand, within AO356_10605 at 2415.484 kb on + strand, within AO356_10605 at 2415.485 kb on - strand, within AO356_10605 at 2415.752 kb on - strand at 2415.811 kb on + strand at 2415.812 kb on - strand at 2415.812 kb on - strand at 2415.812 kb on - strand at 2415.812 kb on - strand at 2415.812 kb on - strand at 2415.928 kb on + strand at 2415.929 kb on - strand at 2415.929 kb on - strand at 2415.929 kb on - strand at 2415.929 kb on - strand at 2416.043 kb on + strand at 2416.044 kb on - strand at 2416.044 kb on - strand at 2416.044 kb on - strand at 2416.061 kb on - strand at 2416.061 kb on - strand at 2416.395 kb on + strand, within AO356_10610 at 2416.395 kb on + strand, within AO356_10610 at 2416.396 kb on - strand, within AO356_10610 at 2416.396 kb on - strand, within AO356_10610 at 2416.396 kb on - strand, within AO356_10610 at 2416.581 kb on + strand at 2416.581 kb on + strand at 2416.581 kb on + strand at 2416.581 kb on + strand at 2416.581 kb on + strand at 2416.581 kb on + strand at 2416.582 kb on - strand at 2416.582 kb on - strand at 2416.582 kb on - strand at 2416.582 kb on - strand at 2416.582 kb on - strand at 2416.582 kb on - strand at 2416.582 kb on - strand at 2417.309 kb on - strand, within AO356_10615
Per-strain Table
Position Strand Gene LocusTag Fraction Sisomicin 0.001 mg/ml remove 2,415,199 + AO356_10605 0.75 +0.9 2,415,199 + AO356_10605 0.75 +0.3 2,415,199 + AO356_10605 0.75 +0.6 2,415,199 + AO356_10605 0.75 -0.6 2,415,200 - AO356_10605 0.75 +0.5 2,415,308 + AO356_10605 0.78 +1.2 2,415,308 + AO356_10605 0.78 -0.2 2,415,308 + AO356_10605 0.78 +0.5 2,415,308 + AO356_10605 0.78 +0.6 2,415,308 + AO356_10605 0.78 -0.2 2,415,308 + AO356_10605 0.78 +1.0 2,415,308 + AO356_10605 0.78 +0.9 2,415,308 + AO356_10605 0.78 +0.5 2,415,309 - AO356_10605 0.78 -2.2 2,415,484 + AO356_10605 0.83 +0.4 2,415,484 + AO356_10605 0.83 -0.2 2,415,484 + AO356_10605 0.83 -0.2 2,415,484 + AO356_10605 0.83 +0.3 2,415,484 + AO356_10605 0.83 -0.9 2,415,485 - AO356_10605 0.83 +0.3 2,415,752 - -0.6 2,415,811 + +0.0 2,415,812 - -0.6 2,415,812 - +0.5 2,415,812 - +0.4 2,415,812 - +0.9 2,415,812 - +0.2 2,415,928 + -0.3 2,415,929 - +1.1 2,415,929 - -0.5 2,415,929 - -1.2 2,415,929 - +1.9 2,416,043 + -0.9 2,416,044 - +1.7 2,416,044 - +1.4 2,416,044 - +0.6 2,416,061 - +0.0 2,416,061 - +0.9 2,416,395 + AO356_10610 0.59 -1.5 2,416,395 + AO356_10610 0.59 -0.1 2,416,396 - AO356_10610 0.60 -0.2 2,416,396 - AO356_10610 0.60 -0.0 2,416,396 - AO356_10610 0.60 -0.4 2,416,581 + -0.2 2,416,581 + -1.5 2,416,581 + +1.1 2,416,581 + -0.2 2,416,581 + -0.3 2,416,581 + -0.9 2,416,582 - +1.5 2,416,582 - +0.9 2,416,582 - +0.9 2,416,582 - +0.3 2,416,582 - +0.9 2,416,582 - -0.8 2,416,582 - -0.8 2,417,309 - AO356_10615 0.20 +1.7
Or see this region's nucleotide sequence