Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_10230

Experiment: Sisomicin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.001 mg/ml
2,308,197	+		AO356_10225	0.75	+0.1
2,308,198	-		AO356_10225	0.76	+0.8
2,308,324	+		AO356_10225	0.82	+0.9
2,308,324	+		AO356_10225	0.82	+0.7
2,308,325	-		AO356_10225	0.82	+0.5
2,308,325	-		AO356_10225	0.82	+1.6
2,308,407	+		AO356_10225	0.86	+2.2
2,308,407	+		AO356_10225	0.86	+0.7
2,308,407	+		AO356_10225	0.86	-0.7
2,308,407	+		AO356_10225	0.86	+0.0
2,308,408	-		AO356_10225	0.86	+0.6
2,308,408	-		AO356_10225	0.86	-0.3
2,308,491	+				-0.9
2,308,491	+				-0.8
2,308,491	+				-1.1
2,308,491	+				-0.2
2,308,491	+				-0.0
2,308,491	+				+0.2
2,308,491	+				-0.7
2,308,491	+				+0.5
2,308,492	-				-0.2
2,308,492	-				-0.3
2,308,492	-				-0.5
2,308,492	-				-0.4
2,308,492	-				+0.1
2,308,492	-				+0.9
2,308,492	-				+1.0
2,308,512	+				+1.3
2,308,512	+				+0.9
2,308,512	+				-0.2
2,308,512	+				+0.6
2,308,512	+				-1.2
2,308,512	+				-0.1
2,308,512	+				-0.7
2,308,512	+				+0.1
2,308,512	+				-0.2
2,308,512	+				+1.0
2,308,513	-				-1.1
2,308,513	-				+0.7
2,308,513	-				+0.2
2,308,513	-				-1.6
2,308,513	-				-0.1
2,308,513	-				+1.0
2,308,513	-				-0.3
2,308,513	-				-1.0
2,308,513	-				+0.0
2,308,513	-				+0.6
2,308,513	-				-0.1
2,308,513	-				+2.2
2,308,513	-				+0.1
2,308,515	+				+1.7
2,308,516	-				-0.7
2,308,529	-				-0.2
2,308,629	+				+1.1
2,308,630	-				+3.0
2,308,630	-				-1.2
2,308,630	-				+1.3
2,308,754	+				+1.3
2,308,754	+				-2.1
2,308,755	-				-0.6
2,308,755	-				-2.0
2,308,783	+				-0.2
2,308,783	+				-0.1
2,308,806	-				-0.3
2,308,815	+				+0.7
2,308,815	+				+0.5
2,308,816	-				-1.6
2,308,816	-				-2.1
2,308,823	+				+0.4
2,308,823	+				+0.3
2,308,823	+				+0.8
2,308,823	+				+0.5
2,308,824	-				+0.1
2,308,858	+				-1.4
2,308,858	+				-0.7
2,308,858	+				-1.0
2,308,858	+				-2.5
2,308,858	+				+0.2
2,308,859	-				+0.1
2,308,859	-				+0.5
2,308,868	+				-2.0
2,308,878	+				-1.1
2,308,879	-				+1.2
2,308,879	-				-0.2
2,308,879	-				-0.3
2,308,912	+				-0.7
2,308,912	+				-1.0
2,308,912	+				+0.8
2,308,913	-				-1.1
2,308,913	-				+0.3
2,308,913	-				+1.4
2,308,919	+				+0.5
2,308,919	+				-0.1
2,308,919	+				+1.1
2,308,920	-				+0.7
2,308,920	-				-0.3
2,308,920	-				-0.2
2,308,920	-				-0.0
2,308,921	+				+0.8
2,308,921	+				-0.4
2,308,921	+				+0.2
2,308,921	+				-0.9
2,308,921	+				+0.5
2,308,921	+				+0.8
2,308,921	+				+0.8
2,308,921	+				+0.2
2,308,921	+				+0.5
2,308,921	+				+0.2
2,308,921	+				-0.8
2,308,921	+				+0.7
2,308,921	+				+0.4
2,308,921	+				+0.5
2,308,922	-				-1.5
2,308,922	-				-0.8
2,308,922	-				-1.5
2,308,922	-				-0.7
2,308,922	-				-1.7
2,308,922	-				+0.6
2,308,922	-				+0.9
2,308,922	-				-0.4
2,308,922	-				-0.5
2,308,922	-				-1.8
2,308,922	-				-1.7
2,308,922	-				-0.9
2,308,922	-				-0.6
2,308,922	-				-0.7
2,308,922	-				+0.6
2,308,922	-				+2.6
2,308,922	-				-1.4
2,308,962	+				-0.7
2,308,962	+				+0.5
2,308,962	+				-0.8
2,308,962	+				+0.0
2,308,963	-				-0.4
2,308,963	-				-0.3
2,308,963	-				+0.1
2,308,974	+				-0.4
2,308,975	-				-0.6
2,309,039	+				+0.3
2,309,039	+				-0.1
2,309,039	+				-2.4
2,309,039	+				-0.9
2,309,039	+				+0.3
2,309,039	+				-0.7
2,309,040	-				+0.1
2,309,040	-				-0.2
2,309,040	-				+0.4
2,309,073	+				+2.6
2,309,074	-				-1.8
2,309,074	-				-2.4
2,309,074	-				+0.5
2,309,074	-				+1.1
2,309,120	+				+0.5
2,309,120	+				+0.2
2,309,120	+				-0.5
2,309,121	-				-0.3
2,309,121	-				+0.2
2,309,121	-				+0.5
2,309,122	+				-0.3
2,309,122	+				-0.4
2,309,123	-				-0.1
2,309,138	+				+1.1
2,309,138	+				-0.7
2,309,138	+				-0.6
2,309,138	+				-0.2
2,309,139	-				+0.5
2,309,139	-				-0.8
2,309,139	-				-0.2
2,309,139	-				+0.2
2,309,139	-				-0.1
2,309,139	-				-1.3
2,309,139	-				-0.8
2,309,147	+				+1.1
2,309,182	+				-0.3
2,309,261	+		AO356_10230	0.11	+1.0
2,309,261	+		AO356_10230	0.11	-0.5
2,309,261	+		AO356_10230	0.11	-0.8
2,309,261	+		AO356_10230	0.11	-0.9
2,309,261	+		AO356_10230	0.11	+0.3
2,309,261	+		AO356_10230	0.11	-0.4
2,309,261	+		AO356_10230	0.11	-0.9
2,309,261	+		AO356_10230	0.11	+1.0
2,309,261	+		AO356_10230	0.11	+0.6
2,309,261	+		AO356_10230	0.11	+1.0
2,309,261	+		AO356_10230	0.11	+1.0
2,309,262	-		AO356_10230	0.11	+1.3
2,309,262	-		AO356_10230	0.11	+0.7
2,309,262	-		AO356_10230	0.11	-0.5
2,309,262	-		AO356_10230	0.11	-0.7
2,309,262	-		AO356_10230	0.11	+1.0
2,309,262	-		AO356_10230	0.11	+0.2
2,309,262	-		AO356_10230	0.11	-0.0
2,309,262	-		AO356_10230	0.11	-0.8
2,309,325	-		AO356_10230	0.17	-1.3
2,309,325	-		AO356_10230	0.17	-0.7
2,309,325	-		AO356_10230	0.17	+1.2
2,309,397	+		AO356_10230	0.24	+0.5
2,309,398	-		AO356_10230	0.24	-0.6
2,309,398	-		AO356_10230	0.24	-2.0
2,309,483	+		AO356_10230	0.33	-0.6
2,309,483	+		AO356_10230	0.33	+0.5
2,309,483	+		AO356_10230	0.33	+0.2
2,309,483	+		AO356_10230	0.33	-0.4
2,309,483	+		AO356_10230	0.33	-0.5
2,309,483	+		AO356_10230	0.33	-0.1
2,309,483	+		AO356_10230	0.33	-0.6
2,309,483	+		AO356_10230	0.33	+0.1
2,309,484	-		AO356_10230	0.33	-1.0
2,309,484	-		AO356_10230	0.33	-0.6
2,309,484	-		AO356_10230	0.33	-0.8
2,309,539	-		AO356_10230	0.39	-1.3
2,309,539	-		AO356_10230	0.39	+0.6
2,309,539	-		AO356_10230	0.39	+0.2
2,309,615	+		AO356_10230	0.46	-0.1
2,309,615	+		AO356_10230	0.46	+0.3
2,309,616	-		AO356_10230	0.46	-0.4
2,309,660	+		AO356_10230	0.51	-0.2
2,309,660	+		AO356_10230	0.51	-0.1
2,309,661	-		AO356_10230	0.51	-1.2
2,309,661	-		AO356_10230	0.51	-2.1
2,309,661	-		AO356_10230	0.51	-1.5
2,309,661	-		AO356_10230	0.51	-0.1
2,309,661	-		AO356_10230	0.51	+0.1
2,309,661	-		AO356_10230	0.51	-0.5
2,309,727	+		AO356_10230	0.58	-0.8
2,309,727	+		AO356_10230	0.58	-1.0
2,309,728	-		AO356_10230	0.58	+1.1
2,309,728	-		AO356_10230	0.58	+3.4
2,309,728	-		AO356_10230	0.58	-0.3
2,309,930	+		AO356_10230	0.78	-0.5
2,309,930	+		AO356_10230	0.78	+1.2
2,309,930	+		AO356_10230	0.78	-1.0
2,309,930	+		AO356_10230	0.78	-0.7
2,309,931	-		AO356_10230	0.78	+0.8
2,309,931	-		AO356_10230	0.78	-0.5
2,309,931	-		AO356_10230	0.78	+0.3
2,310,023	+		AO356_10230	0.87	-1.5
2,310,131	+				-0.6
2,310,132	-				+0.1
2,310,133	+				-0.1
2,310,134	-				+0.8
2,310,134	-				-1.6
2,310,134	-				+1.0
2,310,134	-				-0.5
2,310,278	-				-0.6
2,310,278	-				-2.0
2,310,279	+				+0.3
2,310,279	+				+0.0
2,310,322	+				-0.6
2,310,322	+				-0.3
2,310,322	+				-0.1
2,310,322	+				+0.3
2,310,322	+				+0.5
2,310,322	+				+0.1
2,310,322	+				-0.7
2,310,322	+				-0.1
2,310,322	+				-1.0
2,310,322	+				-0.7
2,310,322	+				-0.3
2,310,322	+				-1.4
2,310,322	+				+0.2
2,310,322	+				-0.5
2,310,322	+				+0.3
2,310,322	+				-0.0
2,310,322	+				-0.1
2,310,323	-				+1.3
2,310,323	-				+1.1
2,310,323	-				-0.3
2,310,323	-				-0.7
2,310,323	-				-0.4
2,310,323	-				-0.5
2,310,323	-				-0.6
2,310,323	-				+0.3
2,310,323	-				-1.6
2,310,323	-				-1.8
2,310,323	-				+0.5
2,310,323	-				-0.1
2,310,323	-				+2.3
2,310,323	-				+0.1
2,310,323	-				+0.5
2,310,323	-				-0.4
2,310,323	-				-0.5
2,310,323	-				+0.9
2,310,323	-				+1.6
2,310,323	-				+0.5
2,310,323	-				+1.0
2,310,323	-				+0.7
2,310,323	-				+0.3
2,310,323	-				+0.1
2,310,323	-				-0.5
2,310,323	-				-0.7
2,310,323	-				-0.0
2,310,323	-				-0.5
2,310,324	+				+0.9
2,310,324	+				-0.1
2,310,325	-				+0.9
2,310,341	+				+0.2
2,310,341	+				-2.2
2,310,341	+				+0.5
2,310,341	+				-1.3
2,310,341	+				-0.2
2,310,342	-				+0.4
2,310,342	-				+0.4
2,310,370	-				+0.3
2,310,404	+				+0.5
2,310,411	+				+2.1
2,310,411	+				+0.6
2,310,411	+				+0.4
2,310,411	+				+0.8
2,310,411	+				-1.3
2,310,411	+				+0.7
2,310,411	+				+0.2
2,310,411	+				-0.0
2,310,412	-				-0.1
2,310,425	+				+0.5
2,310,425	+				+0.5
2,310,425	+				-0.7
2,310,426	-				-0.1
2,310,435	+				+0.1
2,310,436	-				-0.5
2,310,436	-				+0.3
2,310,473	+				-0.6
2,310,473	+				+0.1
2,310,473	+				+0.3
2,310,473	+				-0.6
2,310,473	+				-0.0
2,310,474	-				+0.1
2,310,474	-				+0.5
2,310,474	-				+0.8
2,310,474	-				+0.8
2,310,604	+		AO356_10235	0.18	-0.1
2,310,604	+		AO356_10235	0.18	+2.0
2,310,604	+		AO356_10235	0.18	+1.3
2,310,604	+		AO356_10235	0.18	+0.7
2,310,604	+		AO356_10235	0.18	+0.8
2,310,604	+		AO356_10235	0.18	-1.6
2,310,605	-		AO356_10235	0.18	+0.4
2,310,605	-		AO356_10235	0.18	+1.1
2,310,605	-		AO356_10235	0.18	-1.0
2,310,605	-		AO356_10235	0.18	+0.0
2,310,605	-		AO356_10235	0.18	-1.4
2,310,605	-		AO356_10235	0.18	+0.5
2,310,605	-		AO356_10235	0.18	+0.6
2,310,605	-		AO356_10235	0.18	+2.0
2,310,795	+		AO356_10235	0.42	+0.0
2,310,796	-		AO356_10235	0.42	+0.3
2,310,796	-		AO356_10235	0.42	+0.1
2,310,796	-		AO356_10235	0.42	+0.3
2,310,806	-		AO356_10235	0.44	+0.1
2,310,806	-		AO356_10235	0.44	-0.8
2,310,806	-		AO356_10235	0.44	+0.7
2,310,823	+		AO356_10235	0.46	-0.8
2,310,823	+		AO356_10235	0.46	-1.2
2,310,823	+		AO356_10235	0.46	+0.1
2,310,851	+		AO356_10235	0.49	-1.0
2,310,852	-		AO356_10235	0.49	+0.1
2,310,907	-		AO356_10235	0.56	+0.1
2,310,937	+		AO356_10235	0.60	+0.5
2,310,938	-		AO356_10235	0.60	+1.0
2,310,938	-		AO356_10235	0.60	-0.3
2,310,938	-		AO356_10235	0.60	+0.1
2,310,938	-		AO356_10235	0.60	-0.2
2,310,950	+		AO356_10235	0.62	-0.7
2,310,950	+		AO356_10235	0.62	-0.6
2,310,951	-		AO356_10235	0.62	-2.1
2,310,963	-		AO356_10235	0.63	+0.3
2,310,963	-		AO356_10235	0.63	-0.5
2,310,985	+		AO356_10235	0.66	+0.6
2,310,985	+		AO356_10235	0.66	+0.8
2,310,985	+		AO356_10235	0.66	+0.5
2,310,986	-		AO356_10235	0.66	-0.2
2,310,986	-		AO356_10235	0.66	-0.7
2,310,986	-		AO356_10235	0.66	-1.2
2,311,069	+		AO356_10235	0.76	+1.6
2,311,070	-		AO356_10235	0.77	+0.4
2,311,070	-		AO356_10235	0.77	-0.2
2,311,070	-		AO356_10235	0.77	+1.1