Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_06425

Experiment: Sisomicin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.001 mg/ml
1,422,180	+		AO356_06420	0.64	-0.7
1,422,180	+		AO356_06420	0.64	-2.2
1,422,180	+		AO356_06420	0.64	-1.1
1,422,180	+		AO356_06420	0.64	-0.6
1,422,181	-		AO356_06420	0.65	+0.9
1,422,181	-		AO356_06420	0.65	-1.0
1,422,181	-		AO356_06420	0.65	+1.5
1,422,267	+		AO356_06420	0.71	+0.3
1,422,268	-		AO356_06420	0.72	+0.5
1,422,268	-		AO356_06420	0.72	-0.5
1,422,277	+		AO356_06420	0.72	+0.6
1,422,277	+		AO356_06420	0.72	-1.4
1,422,278	-		AO356_06420	0.72	+0.1
1,422,593	+				-1.9
1,422,594	-				-0.4
1,422,594	-				-0.3
1,422,594	-				-0.0
1,422,594	-				+0.3
1,422,594	-				+0.0
1,422,618	+				-2.2
1,422,618	+				+1.3
1,422,618	+				-0.0
1,422,619	-				-0.3
1,422,709	+				+1.0
1,422,709	+				+0.3
1,422,709	+				+0.2
1,422,709	+				-0.7
1,422,709	+				-0.4
1,422,709	+				+0.8
1,422,709	+				+1.7
1,422,710	-				-0.0
1,422,710	-				-1.0
1,422,710	-				-0.3
1,422,710	-				-0.8
1,422,710	-				+0.2
1,422,710	-				-0.4
1,422,710	-				-1.1
1,422,710	-				+0.1
1,422,711	+				-0.4
1,422,711	+				+0.1
1,422,712	-				+0.1
1,422,712	-				-0.1
1,422,751	+				+1.2
1,422,867	+				-1.3
1,422,867	+				-1.3
1,422,867	+				-0.8
1,422,868	-				+1.0
1,422,868	-				+0.6
1,422,870	+				-1.0
1,422,870	+				+1.0
1,422,870	+				-0.3
1,422,870	+				-0.8
1,422,870	+				+0.2
1,422,871	-				-0.9
1,422,871	-				-1.3
1,422,871	-				-0.3
1,422,871	-				+2.7
1,423,010	+				-0.8
1,423,010	+				+0.8
1,423,011	-				-0.2
1,423,011	-				-0.8
1,423,019	+				+1.2
1,423,019	+				+0.1
1,423,019	+				+0.6
1,423,019	+				-1.3
1,423,019	+				-1.3
1,423,019	+				+1.0
1,423,019	+				+0.2
1,423,019	+				-1.6
1,423,019	+				+0.5
1,423,019	+				-0.2
1,423,020	-				+1.9
1,423,020	-				-0.6
1,423,020	-				-0.1
1,423,020	-				+0.7
1,423,020	-				+0.1
1,423,020	-				-1.6
1,423,020	-				+0.0
1,423,020	-				+2.3
1,423,020	-				+0.8
1,423,020	-				-0.4
1,423,025	+				+0.7
1,423,025	+				-1.4
1,423,025	+				-0.2
1,423,026	-				+0.5
1,423,544	+		AO356_06425	0.48	+0.4
1,423,545	-		AO356_06425	0.48	+2.6
1,423,545	-		AO356_06425	0.48	-1.5
1,423,545	-		AO356_06425	0.48	-1.4
1,423,545	-		AO356_06425	0.48	+1.8
1,423,545	-		AO356_06425	0.48	-1.7
1,423,545	-		AO356_06425	0.48	-0.1
1,423,697	+		AO356_06425	0.60	+0.6
1,423,697	+		AO356_06425	0.60	+0.5
1,423,697	+		AO356_06425	0.60	-0.4
1,423,697	+		AO356_06425	0.60	+1.0
1,423,697	+		AO356_06425	0.60	-1.2
1,423,698	-		AO356_06425	0.60	-0.2
1,423,698	-		AO356_06425	0.60	+0.3
1,423,711	-		AO356_06425	0.61	-0.8
1,423,724	+		AO356_06425	0.62	-1.2
1,423,724	+		AO356_06425	0.62	-1.8
1,423,725	-		AO356_06425	0.62	+0.0
1,423,732	-		AO356_06425	0.62	+0.4
1,423,745	+		AO356_06425	0.63	+0.0
1,423,786	-		AO356_06425	0.67	-1.8
1,424,027	+		AO356_06425	0.85	-0.2
1,424,027	+		AO356_06425	0.85	-0.0
1,424,028	-		AO356_06425	0.85	-0.2
1,424,029	+		AO356_06425	0.85	+0.4
1,424,126	+				-1.0
1,424,127	-				-0.1
1,424,127	-				+1.0
1,424,127	-				+0.3
1,424,127	-				+0.2
1,424,127	-				-0.7
1,424,296	+				+0.1
1,424,296	+				-0.2
1,424,296	+				+0.1
1,424,346	+				-0.4
1,424,346	+				+0.2
1,424,346	+				+0.1
1,424,346	+				-1.3
1,424,346	+				+0.5
1,424,346	+				-0.4
1,424,346	+				-1.2
1,424,346	+				-1.5
1,424,346	+				+0.1
1,424,347	-				-1.1
1,424,347	-				-0.4
1,424,347	-				-0.7
1,424,347	-				-0.6
1,424,347	-				-0.3
1,424,347	-				-0.6
1,424,347	-				+0.3
1,424,347	-				-0.7
1,424,347	-				+0.3
1,424,395	-				-1.2
1,424,395	-				+0.1
1,424,395	-				-0.8
1,424,406	+				+1.3
1,424,413	+				-1.3
1,424,494	+				-1.3
1,424,494	+				-0.1
1,424,494	+				+1.1
1,424,494	+				+0.1
1,424,494	+				-1.7
1,424,494	+				-0.4
1,424,494	+				-1.4
1,424,494	+				+0.8
1,424,494	+				-1.2
1,424,495	-				-0.3
1,424,495	-				+0.4
1,424,495	-				-0.9
1,424,495	-				+0.1
1,424,495	-				+0.9
1,424,495	-				-1.3
1,424,495	-				-0.3
1,424,495	-				-0.6
1,424,495	-				-0.5
1,424,495	-				+2.1
1,424,495	-				-0.0
1,424,495	-				+0.3
1,424,495	-				-1.5
1,424,495	-				-0.2
1,424,681	-		AO356_06430	0.13	-0.8
1,424,815	+		AO356_06430	0.18	+0.6
1,424,857	+		AO356_06430	0.20	-0.6
1,424,911	+		AO356_06430	0.22	+0.5
1,424,912	-		AO356_06430	0.22	-2.0
1,424,932	+		AO356_06430	0.23	-0.2
1,424,933	-		AO356_06430	0.23	+0.2
1,424,933	-		AO356_06430	0.23	+0.6
1,425,039	+		AO356_06430	0.27	-0.9
1,425,039	+		AO356_06430	0.27	-0.1
1,425,039	+		AO356_06430	0.27	+0.6
1,425,039	+		AO356_06430	0.27	+1.2
1,425,040	-		AO356_06430	0.27	+2.0
1,425,040	-		AO356_06430	0.27	+0.2
1,425,040	-		AO356_06430	0.27	-0.3
1,425,040	-		AO356_06430	0.27	+0.0
1,425,177	+		AO356_06430	0.33	-1.4
1,425,177	+		AO356_06430	0.33	+0.8
1,425,177	+		AO356_06430	0.33	+0.3
1,425,177	+		AO356_06430	0.33	-2.0
1,425,177	+		AO356_06430	0.33	+0.7
1,425,177	+		AO356_06430	0.33	+0.3
1,425,178	-		AO356_06430	0.33	-1.4
1,425,178	-		AO356_06430	0.33	-0.3
1,425,178	-		AO356_06430	0.33	+1.1
1,425,178	-		AO356_06430	0.33	-1.8
1,425,178	-		AO356_06430	0.33	-0.0
1,425,178	-		AO356_06430	0.33	+0.1