Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_05520

Experiment: Sisomicin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.001 mg/ml
1,235,588	+				-2.8
1,235,588	+				-0.1
1,235,588	+				+0.6
1,235,614	+				-2.3
1,235,614	+				+0.1
1,235,614	+				-1.3
1,235,614	+				+0.7
1,235,615	-				-0.6
1,235,615	-				-0.1
1,235,622	-				+1.2
1,235,713	+		AO356_05515	0.17	-0.8
1,235,713	+		AO356_05515	0.17	+0.0
1,235,714	-		AO356_05515	0.17	-0.7
1,235,728	+		AO356_05515	0.19	-0.2
1,235,728	+		AO356_05515	0.19	-0.9
1,235,728	+		AO356_05515	0.19	-0.5
1,235,728	+		AO356_05515	0.19	-0.9
1,235,729	-		AO356_05515	0.19	+1.0
1,235,729	-		AO356_05515	0.19	+0.3
1,235,978	+		AO356_05515	0.51	-0.8
1,235,978	+		AO356_05515	0.51	-1.2
1,236,291	+				+1.0
1,236,291	+				-0.6
1,236,292	-				-0.8
1,236,347	+				-1.8
1,236,348	-				-0.7
1,236,508	+				-1.6
1,236,508	+				-0.5
1,236,508	+				+0.4
1,236,509	-				-1.7
1,236,521	-				-0.1
1,236,647	-				-0.2
1,236,647	-				-0.4
1,236,647	-				-1.0
1,236,711	+				+0.8
1,236,711	+				-1.2
1,236,711	+				+0.7
1,236,711	+				-0.5
1,236,711	+				-0.8
1,236,711	+				+0.3
1,236,711	+				-0.2
1,236,712	-				+0.6
1,236,712	-				-0.8
1,236,712	-				+0.5
1,236,712	-				+0.4
1,236,712	-				+0.3
1,236,712	-				-0.5
1,237,096	+		AO356_05520	0.21	-0.5
1,237,096	+		AO356_05520	0.21	-1.0
1,237,096	+		AO356_05520	0.21	-0.5
1,237,096	+		AO356_05520	0.21	-0.4
1,237,096	+		AO356_05520	0.21	-1.7
1,237,096	+		AO356_05520	0.21	+1.3
1,237,097	-		AO356_05520	0.21	-0.5
1,237,097	-		AO356_05520	0.21	+0.9
1,237,097	-		AO356_05520	0.21	+0.2
1,237,399	-		AO356_05520	0.33	+1.4
1,237,399	-		AO356_05520	0.33	-1.8
1,237,454	+		AO356_05520	0.36	+0.3
1,237,454	+		AO356_05520	0.36	+0.1
1,237,454	+		AO356_05520	0.36	-0.3
1,237,454	+		AO356_05520	0.36	-0.7
1,237,455	-		AO356_05520	0.36	+1.3
1,237,455	-		AO356_05520	0.36	+0.8
1,237,455	-		AO356_05520	0.36	-1.1
1,237,455	-		AO356_05520	0.36	+0.9
1,237,906	+		AO356_05520	0.54	-0.3
1,238,196	+		AO356_05520	0.65	+0.8
1,238,196	+		AO356_05520	0.65	-1.1
1,238,196	+		AO356_05520	0.65	+0.7
1,238,196	+		AO356_05520	0.65	+0.2
1,238,196	+		AO356_05520	0.65	+0.4
1,238,197	-		AO356_05520	0.65	-0.6
1,238,197	-		AO356_05520	0.65	+0.1
1,238,197	-		AO356_05520	0.65	-0.2
1,238,197	-		AO356_05520	0.65	+0.7
1,238,197	-		AO356_05520	0.65	-0.7
1,238,197	-		AO356_05520	0.65	-0.1
1,238,197	-		AO356_05520	0.65	+0.2
1,238,197	-		AO356_05520	0.65	-1.1
1,238,197	-		AO356_05520	0.65	+1.0
1,238,550	+		AO356_05520	0.80	-1.5
1,238,550	+		AO356_05520	0.80	+0.0
1,238,551	-		AO356_05520	0.80	-0.2
1,238,796	+		AO356_05520	0.90	-0.8
1,238,796	+		AO356_05520	0.90	+0.1
1,238,796	+		AO356_05520	0.90	-2.4
1,238,796	+		AO356_05520	0.90	+0.9
1,238,796	+		AO356_05520	0.90	-1.9
1,238,796	+		AO356_05520	0.90	+0.5
1,239,122	+		AO356_05525	0.10	-0.6
1,239,122	+		AO356_05525	0.10	-0.5
1,239,123	-		AO356_05525	0.10	+0.2
1,239,123	-		AO356_05525	0.10	-0.9
1,239,123	-		AO356_05525	0.10	-0.6
1,239,123	-		AO356_05525	0.10	-0.2
1,239,123	-		AO356_05525	0.10	+0.5
1,239,249	+		AO356_05525	0.29	+0.3
1,239,249	+		AO356_05525	0.29	-0.1
1,239,249	+		AO356_05525	0.29	+1.7
1,239,250	-		AO356_05525	0.30	+0.5
1,239,459	+		AO356_05525	0.61	+0.5
1,239,491	-		AO356_05525	0.66	+1.0
1,239,539	+		AO356_05525	0.74	+0.7
1,239,540	-		AO356_05525	0.74	+0.1
1,239,696	+				-0.1
1,239,696	+				-0.6
1,239,697	-				-0.5
1,239,697	-				+0.1
1,239,697	-				+1.3
1,239,955	+				-1.2
1,239,956	-				+0.1
1,239,956	-				-0.0
1,239,956	-				-0.6
1,240,006	+				-2.1
1,240,007	-				-0.0
1,240,007	-				+0.5
1,240,007	-				+0.3
1,240,007	-				+0.0
1,240,007	-				+1.1
1,240,015	+				+2.1
1,240,015	+				-1.2
1,240,015	+				+0.2
1,240,015	+				+1.0
1,240,016	-				-0.3
1,240,016	-				+0.8
1,240,016	-				+2.2
1,240,016	-				+0.2
1,240,016	-				+0.2
1,240,016	-				+0.0