Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_05515

Experiment: Sisomicin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.001 mg/ml
1,234,987	+		AO356_05510	0.48	+1.6
1,234,987	+		AO356_05510	0.48	+1.5
1,234,987	+		AO356_05510	0.48	-0.2
1,234,987	+		AO356_05510	0.48	-0.7
1,234,987	+		AO356_05510	0.48	+0.3
1,234,988	-		AO356_05510	0.48	-0.1
1,234,988	-		AO356_05510	0.48	-0.1
1,234,988	-		AO356_05510	0.48	-1.1
1,235,033	-		AO356_05510	0.52	-0.0
1,235,033	-		AO356_05510	0.52	+0.2
1,235,243	-		AO356_05510	0.71	+1.4
1,235,362	+		AO356_05510	0.81	+0.4
1,235,363	-		AO356_05510	0.81	-0.6
1,235,474	-				-0.9
1,235,543	-				-0.2
1,235,558	+				+0.5
1,235,558	+				-0.2
1,235,558	+				+1.4
1,235,559	-				+0.9
1,235,588	+				-2.8
1,235,588	+				-0.1
1,235,588	+				+0.6
1,235,614	+				-2.3
1,235,614	+				+0.1
1,235,614	+				-1.3
1,235,614	+				+0.7
1,235,615	-				-0.6
1,235,615	-				-0.1
1,235,622	-				+1.2
1,235,713	+		AO356_05515	0.17	-0.8
1,235,713	+		AO356_05515	0.17	+0.0
1,235,714	-		AO356_05515	0.17	-0.7
1,235,728	+		AO356_05515	0.19	-0.2
1,235,728	+		AO356_05515	0.19	-0.9
1,235,728	+		AO356_05515	0.19	-0.5
1,235,728	+		AO356_05515	0.19	-0.9
1,235,729	-		AO356_05515	0.19	+1.0
1,235,729	-		AO356_05515	0.19	+0.3
1,235,978	+		AO356_05515	0.51	-0.8
1,235,978	+		AO356_05515	0.51	-1.2
1,236,291	+				+1.0
1,236,291	+				-0.6
1,236,292	-				-0.8
1,236,347	+				-1.8
1,236,348	-				-0.7
1,236,508	+				-1.6
1,236,508	+				-0.5
1,236,508	+				+0.4
1,236,509	-				-1.7
1,236,521	-				-0.1
1,236,647	-				-0.2
1,236,647	-				-0.4
1,236,647	-				-1.0
1,236,711	+				+0.8
1,236,711	+				-1.2
1,236,711	+				+0.7
1,236,711	+				-0.5
1,236,711	+				-0.8
1,236,711	+				+0.3
1,236,711	+				-0.2
1,236,712	-				+0.6
1,236,712	-				-0.8
1,236,712	-				+0.5
1,236,712	-				+0.4
1,236,712	-				+0.3
1,236,712	-				-0.5
1,237,096	+		AO356_05520	0.21	-0.5
1,237,096	+		AO356_05520	0.21	-1.0
1,237,096	+		AO356_05520	0.21	-0.5
1,237,096	+		AO356_05520	0.21	-0.4
1,237,096	+		AO356_05520	0.21	-1.7
1,237,096	+		AO356_05520	0.21	+1.3
1,237,097	-		AO356_05520	0.21	-0.5
1,237,097	-		AO356_05520	0.21	+0.9
1,237,097	-		AO356_05520	0.21	+0.2