Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_04480

Experiment: Sisomicin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.001 mg/ml
1,012,928	+		AO356_04470	0.77	-0.1
1,012,929	-		AO356_04470	0.77	-0.7
1,012,970	+		AO356_04470	0.82	+0.3
1,012,970	+		AO356_04470	0.82	+0.5
1,012,970	+		AO356_04470	0.82	-1.2
1,012,971	-		AO356_04470	0.82	-0.2
1,012,971	-		AO356_04470	0.82	-2.4
1,012,971	-		AO356_04470	0.82	+0.2
1,013,083	+				-0.6
1,013,083	+				-1.8
1,013,083	+				+0.8
1,013,084	-				-0.6
1,013,109	+				+0.5
1,013,166	-				-1.3
1,013,166	-				+0.9
1,013,168	-				+0.9
1,013,168	-				-1.0
1,013,168	-				+0.5
1,013,213	+				-0.3
1,013,213	+				+1.9
1,013,214	-				-0.0
1,013,214	-				-0.4
1,013,214	-				-1.5
1,013,216	+				-0.4
1,013,216	+				+0.2
1,013,217	-				+0.9
1,013,260	-				+0.7
1,013,337	-				-0.2
1,013,337	-				-1.2
1,013,337	-				-0.7
1,013,344	-				-0.5
1,013,390	-				-0.9
1,013,453	+				-0.3
1,013,454	-				-0.5
1,013,454	-				+0.3
1,013,466	-				-1.2
1,013,466	-				+0.4
1,013,561	+		AO356_04475	0.58	-1.6
1,013,561	+		AO356_04475	0.58	-1.3
1,013,561	+		AO356_04475	0.58	+0.2
1,013,561	+		AO356_04475	0.58	+0.7
1,013,561	+		AO356_04475	0.58	+0.6
1,013,562	-		AO356_04475	0.58	+0.8
1,013,562	-		AO356_04475	0.58	-1.0
1,013,562	-		AO356_04475	0.58	-0.7
1,013,562	-		AO356_04475	0.58	-1.3
1,013,562	-		AO356_04475	0.58	+0.2
1,013,562	-		AO356_04475	0.58	+1.0
1,013,663	-				+0.4
1,013,663	-				+1.3
1,013,760	+				+0.1
1,013,760	+				-0.4
1,013,805	-				+1.3
1,013,805	-				-0.8
1,013,810	-				-3.1
1,013,810	-				-0.5
1,013,810	-				-0.5
1,013,812	-				+1.0
1,013,812	-				+0.4
1,013,913	+				-0.9
1,013,913	+				+0.7
1,013,913	+				-1.3
1,013,913	+				+2.4
1,013,914	-				-2.1
1,013,914	-				+0.3
1,013,914	-				+1.1
1,013,931	+		AO356_04480	0.12	-0.7
1,013,932	-		AO356_04480	0.12	-0.6
1,013,955	+		AO356_04480	0.14	+0.1
1,013,955	+		AO356_04480	0.14	-0.6
1,013,955	+		AO356_04480	0.14	-0.7
1,013,955	+		AO356_04480	0.14	+0.6
1,013,955	+		AO356_04480	0.14	+1.1
1,013,956	-		AO356_04480	0.15	+0.2
1,013,956	-		AO356_04480	0.15	-0.1
1,013,956	-		AO356_04480	0.15	+0.4
1,013,956	-		AO356_04480	0.15	+2.3
1,013,997	+		AO356_04480	0.20	-0.1
1,013,998	-		AO356_04480	0.20	+1.0
1,014,017	+		AO356_04480	0.22	-0.6
1,014,017	+		AO356_04480	0.22	-0.7
1,014,018	-		AO356_04480	0.22	-0.1
1,014,097	-		AO356_04480	0.32	-0.3
1,014,108	+		AO356_04480	0.33	+1.4
1,014,108	+		AO356_04480	0.33	-0.3
1,014,108	+		AO356_04480	0.33	+0.5
1,014,108	+		AO356_04480	0.33	-0.2
1,014,108	+		AO356_04480	0.33	+0.0
1,014,109	-		AO356_04480	0.34	-1.3
1,014,109	-		AO356_04480	0.34	+0.5
1,014,109	-		AO356_04480	0.34	-0.3
1,014,109	-		AO356_04480	0.34	-1.3
1,014,109	-		AO356_04480	0.34	-0.3
1,014,109	-		AO356_04480	0.34	+2.5
1,014,109	-		AO356_04480	0.34	+1.3
1,014,109	-		AO356_04480	0.34	-0.1
1,014,109	-		AO356_04480	0.34	+0.3
1,014,110	+		AO356_04480	0.34	-1.5
1,014,110	+		AO356_04480	0.34	+0.6
1,014,110	+		AO356_04480	0.34	-0.6
1,014,111	-		AO356_04480	0.34	+1.9
1,014,112	+		AO356_04480	0.34	+0.3
1,014,112	+		AO356_04480	0.34	+0.7
1,014,112	+		AO356_04480	0.34	-0.6
1,014,112	+		AO356_04480	0.34	+1.3
1,014,112	+		AO356_04480	0.34	+0.4
1,014,112	+		AO356_04480	0.34	+1.1
1,014,113	-		AO356_04480	0.34	+1.4
1,014,113	-		AO356_04480	0.34	+2.5
1,014,113	-		AO356_04480	0.34	-1.0
1,014,113	-		AO356_04480	0.34	-0.6
1,014,113	-		AO356_04480	0.34	+0.6
1,014,113	-		AO356_04480	0.34	-2.3
1,014,113	-		AO356_04480	0.34	-1.4
1,014,267	+		AO356_04480	0.53	-1.0
1,014,267	+		AO356_04480	0.53	-0.0
1,014,267	+		AO356_04480	0.53	+0.7
1,014,267	+		AO356_04480	0.53	-1.4
1,014,267	+		AO356_04480	0.53	+1.3
1,014,267	+		AO356_04480	0.53	+0.3
1,014,267	+		AO356_04480	0.53	-0.0
1,014,267	+		AO356_04480	0.53	+0.4
1,014,268	-		AO356_04480	0.53	+0.3
1,014,268	-		AO356_04480	0.53	-0.7
1,014,268	-		AO356_04480	0.53	-0.8
1,014,268	-		AO356_04480	0.53	+0.3
1,014,268	-		AO356_04480	0.53	-0.4
1,014,268	-		AO356_04480	0.53	+0.5
1,014,477	+		AO356_04480	0.79	-1.2
1,014,477	+		AO356_04480	0.79	+1.7
1,014,477	+		AO356_04480	0.79	+1.2
1,014,477	+		AO356_04480	0.79	-0.5
1,014,477	+		AO356_04480	0.79	+1.8
1,014,478	-		AO356_04480	0.79	+0.8
1,014,478	-		AO356_04480	0.79	-0.7
1,014,478	-		AO356_04480	0.79	+0.4
1,014,478	-		AO356_04480	0.79	-1.2
1,014,478	-		AO356_04480	0.79	+0.6
1,014,528	-		AO356_04480	0.86	+1.7
1,014,593	+				-0.2
1,014,593	+				-0.5
1,014,593	+				+1.2
1,014,593	+				+1.5
1,014,594	-				+1.2
1,014,594	-				+1.8
1,014,594	-				-0.1
1,014,594	-				+0.6
1,014,594	-				-1.0
1,014,608	+				-1.8
1,014,642	+				-0.4
1,014,642	+				+1.1
1,014,643	-				+0.3
1,014,707	+				-1.2
1,014,707	+				+0.3
1,014,707	+				-0.5
1,014,708	-				+0.9
1,014,708	-				-0.0
1,014,712	+				+0.5
1,014,712	+				+0.4
1,014,713	-				-0.2
1,014,781	+				+0.3
1,014,781	+				+1.0
1,014,782	-		AO356_04485	0.10	+1.2
1,014,782	-		AO356_04485	0.10	-0.7
1,014,782	-		AO356_04485	0.10	-0.6
1,014,782	-		AO356_04485	0.10	-0.4
1,014,835	+		AO356_04485	0.24	+0.8
1,014,835	+		AO356_04485	0.24	-0.3
1,014,976	+		AO356_04485	0.63	-1.3
1,014,976	+		AO356_04485	0.63	-1.4
1,014,976	+		AO356_04485	0.63	-0.8
1,014,976	+		AO356_04485	0.63	+1.4
1,014,976	+		AO356_04485	0.63	+0.1
1,014,977	-		AO356_04485	0.63	-0.8
1,014,977	-		AO356_04485	0.63	-0.4
1,014,977	-		AO356_04485	0.63	+0.8
1,014,977	-		AO356_04485	0.63	+0.6
1,015,002	+		AO356_04485	0.70	+2.2
1,015,002	+		AO356_04485	0.70	+1.0
1,015,002	+		AO356_04485	0.70	-0.4
1,015,002	+		AO356_04485	0.70	-0.9
1,015,002	+		AO356_04485	0.70	+0.0
1,015,003	-		AO356_04485	0.70	+0.7
1,015,003	-		AO356_04485	0.70	-1.5
1,015,290	+				+0.8
1,015,291	-				+0.3