Experiment: Sisomicin 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_01260 and AO356_01265 are separated by 135 nucleotides AO356_01265 and AO356_01270 are separated by 299 nucleotides
AO356_01260: AO356_01260 - methyltransferase, at 294,106 to 294,612
_01260
AO356_01265: AO356_01265 - hypothetical protein, at 294,748 to 294,984
_01265
AO356_01270: AO356_01270 - (Fe-S)-binding protein, at 295,284 to 296,696
_01270
Position (kb) 294
295 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 293.772 kb on + strand at 293.772 kb on + strand at 293.772 kb on + strand at 293.773 kb on - strand at 293.773 kb on - strand at 293.773 kb on - strand at 293.773 kb on - strand at 293.819 kb on + strand at 293.819 kb on + strand at 293.820 kb on - strand at 293.820 kb on - strand at 294.035 kb on + strand at 294.035 kb on + strand at 294.036 kb on - strand at 294.036 kb on - strand at 294.101 kb on + strand at 294.101 kb on + strand at 294.101 kb on + strand at 294.101 kb on + strand at 294.101 kb on + strand at 294.101 kb on + strand at 294.101 kb on + strand at 294.101 kb on + strand at 294.101 kb on + strand at 294.102 kb on - strand at 294.102 kb on - strand at 294.102 kb on - strand at 294.102 kb on - strand at 294.102 kb on - strand at 294.157 kb on + strand, within AO356_01260 at 294.158 kb on - strand, within AO356_01260 at 294.158 kb on - strand, within AO356_01260 at 294.158 kb on - strand, within AO356_01260 at 294.187 kb on - strand, within AO356_01260 at 294.187 kb on - strand, within AO356_01260 at 294.187 kb on - strand, within AO356_01260 at 294.187 kb on - strand, within AO356_01260 at 294.187 kb on - strand, within AO356_01260 at 294.187 kb on - strand, within AO356_01260 at 294.187 kb on - strand, within AO356_01260 at 294.355 kb on + strand, within AO356_01260 at 294.355 kb on + strand, within AO356_01260 at 294.355 kb on + strand, within AO356_01260 at 294.356 kb on - strand, within AO356_01260 at 294.356 kb on - strand, within AO356_01260 at 294.356 kb on - strand, within AO356_01260 at 294.406 kb on + strand, within AO356_01260 at 294.637 kb on - strand at 294.718 kb on - strand at 294.718 kb on - strand at 294.889 kb on + strand, within AO356_01265 at 294.889 kb on + strand, within AO356_01265 at 294.889 kb on + strand, within AO356_01265 at 294.889 kb on + strand, within AO356_01265 at 294.890 kb on - strand, within AO356_01265 at 294.890 kb on - strand, within AO356_01265 at 294.890 kb on - strand, within AO356_01265 at 294.890 kb on - strand, within AO356_01265 at 294.892 kb on - strand, within AO356_01265 at 295.016 kb on - strand at 295.016 kb on - strand at 295.016 kb on - strand at 295.108 kb on + strand at 295.108 kb on + strand at 295.245 kb on + strand at 295.262 kb on - strand at 295.262 kb on - strand at 295.262 kb on - strand at 295.292 kb on + strand at 295.292 kb on + strand at 295.293 kb on - strand at 295.293 kb on - strand at 295.293 kb on - strand at 295.293 kb on - strand at 295.293 kb on - strand at 295.312 kb on + strand at 295.312 kb on + strand at 295.312 kb on + strand at 295.815 kb on + strand, within AO356_01270 at 295.815 kb on + strand, within AO356_01270 at 295.888 kb on + strand, within AO356_01270 at 295.963 kb on - strand, within AO356_01270
Per-strain Table
Position Strand Gene LocusTag Fraction Sisomicin 0.001 mg/ml remove 293,772 + -0.7 293,772 + +0.2 293,772 + -0.3 293,773 - +0.4 293,773 - +0.3 293,773 - -1.4 293,773 - -0.5 293,819 + +0.9 293,819 + -1.1 293,820 - -0.0 293,820 - -0.5 294,035 + -1.5 294,035 + -0.5 294,036 - +0.3 294,036 - -1.8 294,101 + -0.3 294,101 + -0.8 294,101 + +1.0 294,101 + +1.8 294,101 + +0.9 294,101 + -0.5 294,101 + -0.7 294,101 + +0.5 294,101 + +0.1 294,102 - -0.6 294,102 - +0.2 294,102 - +0.8 294,102 - +0.2 294,102 - +0.1 294,157 + AO356_01260 0.10 -1.0 294,158 - AO356_01260 0.10 +0.1 294,158 - AO356_01260 0.10 +0.4 294,158 - AO356_01260 0.10 +0.9 294,187 - AO356_01260 0.16 -0.5 294,187 - AO356_01260 0.16 +0.5 294,187 - AO356_01260 0.16 -1.7 294,187 - AO356_01260 0.16 +0.1 294,187 - AO356_01260 0.16 +0.9 294,187 - AO356_01260 0.16 +2.3 294,187 - AO356_01260 0.16 -0.1 294,355 + AO356_01260 0.49 -0.9 294,355 + AO356_01260 0.49 +0.2 294,355 + AO356_01260 0.49 +0.7 294,356 - AO356_01260 0.49 -0.1 294,356 - AO356_01260 0.49 +0.5 294,356 - AO356_01260 0.49 -1.2 294,406 + AO356_01260 0.59 -0.4 294,637 - +1.1 294,718 - +0.6 294,718 - -0.9 294,889 + AO356_01265 0.59 -0.7 294,889 + AO356_01265 0.59 -0.9 294,889 + AO356_01265 0.59 +0.6 294,889 + AO356_01265 0.59 -0.1 294,890 - AO356_01265 0.60 +0.4 294,890 - AO356_01265 0.60 -1.5 294,890 - AO356_01265 0.60 -2.5 294,890 - AO356_01265 0.60 -0.9 294,892 - AO356_01265 0.61 -0.5 295,016 - -0.7 295,016 - -0.5 295,016 - +0.9 295,108 + -0.6 295,108 + +0.1 295,245 + +1.0 295,262 - -1.2 295,262 - +1.6 295,262 - +0.2 295,292 + +1.8 295,292 + +0.2 295,293 - +0.9 295,293 - +1.3 295,293 - +0.6 295,293 - +0.8 295,293 - +1.5 295,312 + +1.0 295,312 + +1.4 295,312 + +1.6 295,815 + AO356_01270 0.38 +0.4 295,815 + AO356_01270 0.38 +0.2 295,888 + AO356_01270 0.43 +0.2 295,963 - AO356_01270 0.48 +3.3
Or see this region's nucleotide sequence