Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_00290

Experiment: Sisomicin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.001 mg/ml
51,940	+		AO356_00280	0.85	+0.6
51,941	-		AO356_00280	0.85	-0.9
51,951	+		AO356_00280	0.87	+1.0
51,951	+		AO356_00280	0.87	+0.4
52,022	+				+0.2
52,050	+				+0.3
52,050	+				-1.1
52,050	+				-0.8
52,050	+				-0.4
52,050	+				+0.7
52,051	-				+0.5
52,051	-				+1.9
52,051	-				+0.2
52,051	-				-0.1
52,051	-				+1.3
52,053	+				-0.8
52,149	+				-0.7
52,170	-				-0.3
52,170	-				+1.0
52,180	+				+0.5
52,180	+				+2.3
52,180	+				+1.5
52,181	-				+0.0
52,181	-				+0.3
52,184	+				-1.0
52,191	+				-1.3
52,245	-				-0.7
52,245	-				+0.3
52,312	-				+0.5
52,319	+				+0.3
52,455	+				-0.6
52,455	+				+0.2
52,455	+				+0.9
52,455	+				-0.1
52,456	-				-2.4
52,456	-				-0.3
52,471	+				+0.1
52,543	+		AO356_00285	0.25	-1.6
52,544	-		AO356_00285	0.25	+0.9
52,647	+		AO356_00285	0.56	-2.2
52,647	+		AO356_00285	0.56	+0.3
52,647	+		AO356_00285	0.56	-0.4
52,648	-		AO356_00285	0.57	-1.1
52,648	-		AO356_00285	0.57	-1.1
52,683	-		AO356_00285	0.67	+0.6
52,749	-		AO356_00285	0.87	+0.8
52,831	-				-1.6
52,831	-				-0.3
52,832	+				+0.3
52,832	+				-0.0
52,930	-				+0.3
52,930	-				-0.8
52,933	+				+0.9
52,933	+				-0.3
52,933	+				-0.0
52,934	-				+2.0
52,934	-				-2.3
52,968	-				-1.9
53,213	-		AO356_00290	0.30	-1.8
53,213	-		AO356_00290	0.30	-1.3
53,426	+		AO356_00290	0.52	+0.1
53,426	+		AO356_00290	0.52	+0.6
53,426	+		AO356_00290	0.52	+0.3
53,427	-		AO356_00290	0.53	+0.1
53,442	+		AO356_00290	0.54	-0.7
53,442	+		AO356_00290	0.54	+0.7
53,537	-		AO356_00290	0.64	+0.0
53,539	+		AO356_00290	0.64	-0.4
53,539	+		AO356_00290	0.64	-1.0
53,540	-		AO356_00290	0.64	-0.5
53,638	+		AO356_00290	0.74	-0.4
53,682	-		AO356_00290	0.79	+0.3
53,689	+		AO356_00290	0.80	+0.1
53,690	-		AO356_00290	0.80	-0.7
53,809	+				+0.1
54,042	-		AO356_00295	0.13	-0.7
54,042	-		AO356_00295	0.13	+0.1
54,083	+		AO356_00295	0.34	-0.4
54,083	+		AO356_00295	0.34	+2.0
54,165	+		AO356_00295	0.76	-0.7
54,165	+		AO356_00295	0.76	+0.8
54,166	-		AO356_00295	0.77	+0.7
54,166	-		AO356_00295	0.77	+0.4
54,184	+		AO356_00295	0.86	-0.5
54,213	+				-0.0
54,214	-				-0.0
54,214	-				+0.8
54,214	-				+0.3
54,263	+				-0.3
54,300	+				+0.6
54,300	+				+2.5
54,301	-				+0.1
54,306	+				+0.6
54,380	+				+0.9
54,402	+				-0.9
54,509	+				+0.4
54,510	-				-0.7
54,510	-				+0.5
54,510	-				-0.3
54,585	-				-0.3
54,585	-				+0.7
54,620	+		AO356_00300	0.10	-0.1
54,620	+		AO356_00300	0.10	+0.1
54,620	+		AO356_00300	0.10	-0.8
54,625	-		AO356_00300	0.11	-1.0
54,625	-		AO356_00300	0.11	+2.3
54,625	-		AO356_00300	0.11	+0.1
54,642	-		AO356_00300	0.12	+0.0
54,692	+		AO356_00300	0.15	+0.7
54,693	-		AO356_00300	0.15	-1.3
54,758	+		AO356_00300	0.18	+0.2
54,759	-		AO356_00300	0.18	+1.6